RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC6A18Q96N87 628 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 NEDD4LQ96PU5 975 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 METTL7AQ9H8H3 244 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GPR55Q9Y2T6 319 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GREB1Q4ZG55 1949 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 KIR2DS5A0A0G2JLQ3 304 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 A0A0G2JNG1 304 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 A6NL46 340 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 NPIPA5E9PKD4 350 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 KIR2DS3K7RE56 304 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 HNRNPKP61978 463 aaKnown RBP eCLIP10.24□□□□□ -0.778e-7■■■■□ 25.6
COL27A1-204ENST00000477421 SRSF5Q13243 272 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 KIR2DS5Q14953 304 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 AGERQ15109 404 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RPL13AP3Q6NVV1 102 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZCCHC12Q6PEW1 402 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF836Q6ZNA1 936 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 MBOAT2Q6ZWT7 520 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 CCDC71Q8IV32 467 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GDPD1Q8N9F7 314 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 PITX2Q99697 317 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 KATNB1Q9BVA0 655 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SLC38A1Q9H2H9 487 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RNF121Q9H920 327 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 CCDC59Q9P031 241 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 NPIPA1Q9UND3 350 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GPR37O15354 613 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 PPM1BO75688 479 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GSTT2P0CG29 244 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GSTT2BP0CG30 244 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RPS27P42677 84 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF81P51508 661 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 TSPAN5P62079 268 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ACTC1P68032 377 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ACTA1P68133 377 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 OC90Q02509 493 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 KCNAB1Q14722 419 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 NDUFA5Q16718 116 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 PLK5Q496M5 336 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ALG10Q5BKT4 473 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 TMEM69Q5SWH9 247 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 AGAP6Q5VW22 663 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 CARD17Q5XLA6 110 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 XKRXQ6PP77 449 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 MS4A15Q8N5U1 240 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF431Q8TF32 576 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 TM9SF4Q92544 642 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 GHSRQ92847 366 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF566Q969W8 418 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 AGAP4Q96P64 663 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 OPALINQ96PE5 141 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ELF4Q99607 663 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 BTBD2Q9BX70 525 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 TEX101Q9BY14 249 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SLIRPQ9GZT3 109 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 C8orf33Q9H7E9 229 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SYNPO2LQ9H987 977 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 PRDM7Q9NQW5 492 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 DIMT1Q9UNQ2 313 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SLC35A3Q9Y2D2 325 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RIF1Q5UIP0 2472 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ANKRD61A6NGH8 418 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 IL1AP01583 271 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SNRPBP14678 240 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 MAKP20794 623 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 FOXK2Q01167 660 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 PRKCDQ05655 676 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZP2Q05996 745 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 INSL4Q14641 139 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 FAM27D1Q5T7N8 215 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 SFTPA2Q8IWL1 248 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ZNF101Q8IZC7 436 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 DAZLQ92904 295 aaKnown RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 LMF1Q96S06 567 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 RANGRFQ9HD47 186 aaPredicted RBP10.24□□□□□ -0.77
COL27A1-204ENST00000477421 ADAM18Q9Y3Q7 739 aa10.24□□□□□ -0.77
COL27A1-204ENST00000477421 MEIS3P1A6NDR6 274 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CTSVO60911 334 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 APBB3O95704 486 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 OR8G3PP0DMU2 310 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 PCMT1P22061 227 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FBLP22087 321 aaKnown RBP10.23□□□□□ -0.77
COL27A1-204ENST00000477421 STOMP27105 288 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 AQP2P41181 271 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 GZMMP51124 257 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 BTG2P78543 158 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 TATDN3Q17R31 274 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 ULK3Q6PHR2 472 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 Q6ZS52 159 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 NANOGP1Q8N7R0 232 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 APH1BQ8WW43 257 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 FKBP10Q96AY3 582 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 MCOLN1Q9GZU1 580 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 GPN1Q9HCN4 374 aaPredicted RBP10.23□□□□□ -0.77
COL27A1-204ENST00000477421 CD93Q9NPY3 652 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 PLCXD1Q9NUJ7 323 aa10.23□□□□□ -0.77
COL27A1-204ENST00000477421 A4GNTQ9UNA3 340 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms