RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 OR5M10Q6IEU7 315 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 ACSM5Q6NUN0 579 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 NUP54Q7Z3B4 507 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 HEATR5AQ86XA9 2040 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 DTX1Q86Y01 620 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 TMCO5AQ8N6Q1 288 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 FAM81AQ8TBF8 368 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
COL4A6-206ENST00000477085 DPH1Q9BZG8 443 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 ASCL3Q9NQ33 180 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 PAK1IP1Q9NWT1 392 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-206ENST00000477085 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
COL4A6-206ENST00000477085 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 A6NHS1 94 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 EIF4E2O60573 245 aaKnown RBP13.18□□□□□ -0.3
COL4A6-206ENST00000477085 HPP00738 406 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 IFI30P13284 250 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 GSTM3P21266 225 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 GIPRP48546 466 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 CTBP2P56545 445 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 FHL1Q13642 323 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 C12orf73Q69YU5 71 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 RASSF6Q6ZTQ3 369 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 MRGPREQ86SM8 312 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ATG4DQ86TL0 474 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ARMC10Q8N2F6 343 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 SLC22A8Q8TCC7 542 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ADAMTS17Q8TE56 1095 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ADAMTS14Q8WXS8 1223 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 TTC9Q92623 222 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-206ENST00000477085 MPP4Q96JB8 637 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 RHNO1Q9BSD3 238 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ADAM19Q9H013 955 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 RPS6KB2Q9UBS0 482 aa13.18□□□□□ -0.3
COL4A6-206ENST00000477085 CELSR3Q9NYQ7 3312 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 EXPH5Q8NEV8 1989 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 SLC1A7O00341 560 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 XPNPEP2O43895 674 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 RBM34P42696 430 aaKnown RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 NUP107P57740 925 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 COPZ1P61923 177 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 PIGFQ07326 219 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 GINS1Q14691 196 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF468Q5VIY5 522 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 TMPRSS11FQ6ZWK6 438 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 TMPRSS7Q7RTY8 843 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 BPIFB6Q8NFQ5 453 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 GPR119Q8TDV5 335 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 NACC2Q96BF6 587 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 TMCO6Q96DC7 493 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 BPIFA2Q96DR5 249 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 NPAS1Q99742 590 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 ADNPQ9H2P0 1102 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 IL20Q9NYY1 176 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 MED31Q9Y3C7 131 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 TRIM64CA6NLI5 447 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 LRRN3E7EW58 273 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 HTR1AP08908 422 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 SLC1A3P43003 542 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 P2RX1P51575 399 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 MLF1P58340 268 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 EFNB1P98172 346 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 NHLH1Q02575 133 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 COL28A1Q2UY09 1125 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 B3GNTL1Q67FW5 361 aaPredicted RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 ZNF620Q6ZNG0 422 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 RPS19BP1Q86WX3 136 aaKnown RBP13.17□□□□□ -0.3
COL4A6-206ENST00000477085 PSMF1Q92530 271 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
COL4A6-206ENST00000477085 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 VGLL3A8MV65 326 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 PTP4A3O75365 173 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 ITPKBP27987 946 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 TACR3P29371 465 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 CASP3P42574 277 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 SLC6A8P48029 635 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 HLCSP50747 726 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 EGR4Q05215 589 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 CHAF1BQ13112 559 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 ATP1A4Q13733 1029 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 BROXQ5VW32 411 aa13.16□□□□□ -0.3
COL4A6-206ENST00000477085 IL20RBQ6UXL0 311 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms