RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 KRT8P05787 483 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 CSNK1EP49674 416 aaKnown RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RTL4Q6ZR62 310 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 LSMEM1Q8N8F7 131 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 SLC37A3Q8NCC5 494 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 SLC2A12Q8TD20 617 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 PTP4A1Q93096 173 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 TEAD3Q99594 435 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 ATF6BQ99941 703 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 ENKD1Q9H0I2 346 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 HAO2Q9NYQ3 351 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 COMMD3Q9UBI1 195 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 GTPBP1O00178 669 aaKnown RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 SRPX2O60687 465 aaPredicted RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 SDC3O75056 442 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RDH16O75452 317 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 TRAPPC2P0DI81 140 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 TRAPPC2BP0DI82 140 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 TYRP1P17643 537 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 HK1P19367 917 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 F8A1P23610 371 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 MTNR1BP49286 362 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 PSG6Q00889 435 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RIN1Q13671 783 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 SLC35F1Q5T1Q4 408 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 VASNQ6EMK4 673 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RBM18Q96H35 190 aaKnown RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 NEDD4LQ96PU5 975 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF426Q9BUY5 554 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 MEPEQ9NQ76 525 aaPredicted RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 STARD5Q9NSY2 213 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 MRPS33Q9Y291 106 aaKnown RBP15.18■□□□□ 0.02
TMEM53-208ENST00000476724 LAMA1P25391 3075 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 SLC19A2O60779 497 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 HLA-DQB1P01920 261 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 MT-ND5P03915 603 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF3P17036 446 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 FUT1P19526 365 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 PTNP21246 168 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 S1PR1P21453 382 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 EVX1P49640 407 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 NXPH1P58417 271 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 TAS2R43P59537 309 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 KLHL12Q53G59 568 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 RSBN1Q5VWQ0 802 aaPredicted RBP15.17■□□□□ 0.02
TMEM53-208ENST00000476724 TMEM91Q6ZNR0 172 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF550Q7Z398 422 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 ARHGEF39Q8N4T4 335 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 OR13C2Q8NGS9 318 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 OR9A4Q8NGU2 314 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 ADAMTS18Q8TE60 1221 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 CNOT9Q92600 299 aaKnown RBP15.17■□□□□ 0.02
TMEM53-208ENST00000476724 KISS1RQ969F8 398 aaPredicted RBP15.17■□□□□ 0.02
TMEM53-208ENST00000476724 AHCYL2Q96HN2 611 aaKnown RBP15.17■□□□□ 0.02
TMEM53-208ENST00000476724 LRFN5Q96NI6 719 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 CTRCQ99895 268 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 PPP1R3EQ9H7J1 279 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 ISG20L2Q9H9L3 353 aaKnown RBP15.17■□□□□ 0.02
TMEM53-208ENST00000476724 FOLH1BQ9HBA9 442 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 FAM60AQ9NP50 221 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 PCDHGB7Q9Y5F8 929 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 TMEM131Q92545 1883 aa15.17■□□□□ 0.02
TMEM53-208ENST00000476724 A0A1B0GWA3 101 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CCDC182A6NF36 153 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 PEPDP12955 493 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 RNH1P13489 461 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ST6GAL1P15907 406 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 SLC6A6P31641 620 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 PSMD4P55036 377 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 PLAURQ03405 335 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 POU4F2Q12837 409 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ELOCQ15369 112 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 TAB1Q15750 504 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 LCN1P1Q5VSP4 162 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 THSD4Q6ZMP0 1018 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 OAFQ86UD1 273 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 MCATQ8IVS2 390 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 C19orf47Q8N9M1 422 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 DEPDC7Q96QD5 511 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 DCLRE1CQ96SD1 692 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 NDC1Q9BTX1 674 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 MED20Q9H944 212 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF221Q9UK13 617 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CD8B2A6NJW9 211 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CTNSO60931 367 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 IFNGP01579 166 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CD8BP10966 210 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ACAA2P42765 397 aaKnown RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 EMDP50402 254 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CAV3P56539 151 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 DAB2P98082 770 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF141Q15928 474 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 PRTGQ2VWP7 1150 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF362Q5T0B9 420 aaPredicted RBP15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CNIH2Q6PI25 160 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 DGAT2L6Q6ZPD8 337 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ZAR1Q86SH2 424 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 CMIPQ8IY22 773 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF595Q8IYB9 648 aa15.16■□□□□ 0.02
TMEM53-208ENST00000476724 RDH10Q8IZV5 341 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms