RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ZCCHC10Q8TBK6 192 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ZNF596Q8TC21 504 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SMPDL3AQ92484 453 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SLC25A46Q96AG3 418 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SMIM12Q96EX1 92 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 CERS2Q96G23 380 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ZNF479Q96JC4 524 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 LCORQ96JN0 433 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 TEX37Q96LM6 180 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR2M4Q96R27 311 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ABHD1Q96SE0 405 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TEX101Q9BY14 249 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 MRPL13Q9BYD1 178 aaKnown RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 SPRTNQ9H040 489 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 TMEM117Q9H0C3 514 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TKTL2Q9H0I9 626 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TLNRD1Q9H1K6 362 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 POFUT1Q9H488 388 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 MID1IP1Q9NPA3 183 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 MKKSQ9NPJ1 570 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 TREX1Q9NSU2 369 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR14J1Q9UGF5 321 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 IL20RAQ9UHF4 553 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 PSORS1C1Q9UIG5 152 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TMEFF2Q9UIK5 374 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 NAGKQ9UJ70 344 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR52A1Q9UKL2 312 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SLC7A11Q9UPY5 501 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 EXO1Q9UQ84 846 aaKnown RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 ATG4BQ9Y4P1 393 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 WIF1Q9Y5W5 379 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 KAT6AQ92794 2004 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 KIAA1551Q9HCM1 1747 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SCN9AQ15858 1988 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3DA0A087WVF3 549 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3IA0A087WXS9 549 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3EA0A087X179 549 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 A0A096LPI6 279 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 LOC105369274A0A096LPK9 316 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 A0A1W2PPC4 97 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR2W5A6NFC9 320 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SLC22A31A6NKX4 558 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 A6NNC1 897 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3LB9A6J9 549 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ANHXE9PGG2 379 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 PHOX2AO14813 284 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 MOSPD3O75425 235 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 KAT7O95251 611 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 NTSR2O95665 410 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 GLP2RO95838 553 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 CST1P01037 141 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 IFNA21P01568 189 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TFP02787 698 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 MT-ND5P03915 603 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 CRYGCP07315 174 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SRPRAP08240 638 aaKnown RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 C1SP09871 688 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 NCK1P16333 377 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ZNF37AP17032 561 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 PTNP21246 168 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TUBG1P23258 451 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 AOAHP28039 575 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SDC4P31431 198 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ZNF41P51814 821 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 PNLIPRP1P54315 467 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ZP1P60852 638 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OGDHQ02218 1023 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 KIAA0141Q14154 515 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 DPYSL3Q14195 570 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SMN1Q16637 294 aaKnown RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 ST3GAL2Q16842 350 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 GOLGA7BQ2TAP0 167 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ARL13AQ5H913 290 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 MARC1Q5VT66 337 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 RNLSQ5VYX0 342 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 LIPMQ5VYY2 423 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3CQ6IPX1 549 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 BTNL3Q6UXE8 466 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ALKAL1Q6UXT8 129 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 DEF8Q6ZN54 512 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 H1FNTQ75WM6 255 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 TMPRSS7Q7RTY8 843 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 PLPPR4Q7Z2D5 763 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 ANKRD33Q7Z3H0 272 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 UBE3DQ7Z6J8 389 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 LDB1Q86U70 411 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 CATSPERDQ86XM0 798 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 KMT5CQ86Y97 462 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TBC1D3Q8IZP1 549 aaPredicted RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 OR4N4Q8N0Y3 316 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 CELF5Q8N6W0 485 aaKnown RBP3.86□□□□□ -1.79
CD55-208ENST00000476590 GPR26Q8NDV2 337 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR56B1Q8NGI3 324 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR52M1Q8NGK5 317 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR13D1Q8NGV5 346 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR8U1Q8NH10 309 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 OR10A6Q8NH74 314 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TMEM163Q8TC26 289 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 SDR42E1Q8WUS8 393 aa3.86□□□□□ -1.79
CD55-208ENST00000476590 TMEM125Q96AQ2 219 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms