RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NIPAL3Q6P499 406 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 FRRS1Q6ZNA5 592 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 MEPCEQ7L2J0 689 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 GDF7Q7Z4P5 450 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 ABI3BPQ7Z7G0 1075 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 PIP4P1Q86T03 277 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 AMZ2Q86W34 360 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 MARCH9Q86YJ5 346 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 GID4Q8IVV7 300 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NKAIN4Q8IVV8 208 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NAXDQ8IW45 347 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 TRIM48Q8IWZ4 208 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 FAM98AQ8NCA5 519 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 OR5D16Q8NGK9 328 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NEIL3Q8TAT5 605 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 PIGXQ8TBF5 258 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 TEX47Q8TBZ9 253 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NANOS1Q8WY41 292 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 HSD17B8Q92506 261 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 ZG16BQ96DA0 208 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 TM4SF19Q96DZ7 209 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 PGLYRP3Q96LB9 341 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 LRFN5Q96NI6 719 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 OR7D2Q96RA2 312 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 DDOQ99489 341 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 FAIM2Q9BWQ8 316 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NDEL1Q9GZM8 345 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 PPIL3Q9H2H8 161 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 UBQLN3Q9H347 655 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 PIGUQ9H490 435 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 MTHFD2LQ9H903 347 aaPredicted RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 SYNPO2LQ9H987 977 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 RPRD1BQ9NQG5 326 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 NANSQ9NR45 359 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 ZCCHC3Q9NUD5 404 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 DDX28Q9NUL7 540 aaKnown RBP6.35□□□□□ -1.39
UBR4-212ENST00000475973 TAC3Q9UHF0 121 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 SERTAD3Q9UJW9 196 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 FBXL3Q9UKT7 428 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 KCNE3Q9Y6H6 103 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 NCOR2Q9Y618 2525 aa6.35□□□□□ -1.39
UBR4-212ENST00000475973 DNAH14Q0VDD8 3507 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CEP250Q9BV73 2442 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 MEIKINA0A087WXM9 373 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 A0A096LPE4 126 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 TEX51A0A1B0GUA7 166 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SPAARA0A1B0GVQ0 90 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 FAM240BA0A1B0GVZ2 78 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 A0A1W2PPZ6 126 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 LRRC72A6NJI9 287 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 WASHC1A8K0Z3 465 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 A8MV72 311 aaPredicted RBP6.34□□□□□ -1.39
UBR4-212ENST00000475973 C10orf142B7Z368 130 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 H7BY64 318 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 J3QW42 95 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CDC42EP2O14613 210 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CASKO14936 926 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 PGRMC2O15173 223 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 PPM1DO15297 605 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 FLRT2O43155 660 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 LANCL1O43813 399 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 RFPL3O75679 317 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 RGS9O75916 674 aaPredicted RBP6.34□□□□□ -1.39
UBR4-212ENST00000475973 OR2B3O76000 313 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SOX30O94993 753 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 AGR2O95994 175 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 PAHP00439 452 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CSF2P04141 144 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 TPOP07202 933 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 ZNF883P0CG24 379 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SULT1A3P0DMM9 295 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SULT1A4P0DMN0 295 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 TYRP1P17643 537 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 MAOBP27338 520 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 BCL6P41182 706 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 RAB28P51157 221 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 ATP12AP54707 1039 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CAV3P56539 151 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 HSPB3Q12988 150 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 CAMK2DQ13557 499 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 DYRK1AQ13627 763 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 ELAVL3Q14576 367 aaKnown RBP6.34□□□□□ -1.39
UBR4-212ENST00000475973 SUZ12Q15022 739 aaKnown RBP6.34□□□□□ -1.39
UBR4-212ENST00000475973 WSCD2Q2TBF2 565 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 ARHGAP11BQ3KRB8 267 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 PIP5KL1Q5T9C9 394 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.39
UBR4-212ENST00000475973 GARNL3Q5VVW2 1013 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 BICRALQ6AI39 1079 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SLC30A6Q6NXT4 461 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 PAMR1Q6UXH9 720 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 LINC00114Q6XXX2 140 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 SYT9Q86SS6 491 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 LRRTM4Q86VH4 590 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 TRAPPC5Q8IUR0 188 aa6.34□□□□□ -1.39
UBR4-212ENST00000475973 OR2L13Q8N349 312 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms