RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 TOMM40LQ969M1 308 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 PPP1R16AQ96I34 528 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 NUP58Q9BVL2 599 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 CAB39LQ9H9S4 337 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 TXLNGQ9NUQ3 528 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 DDX18Q9NVP1 670 aaKnown RBP4.29□□□□□ -1.72
SDHB-205ENST00000475506 IMPAD1Q9NX62 359 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 NISCHQ9Y2I1 1504 aa4.29□□□□□ -1.72
SDHB-205ENST00000475506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.28□□□□□ -1.724e-7■■■■■ 35.6
SDHB-205ENST00000475506 RALGAPA1Q6GYQ0 2036 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 ZNF705EA8MWA4 302 aaPredicted RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 E9PAM4 449 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 F5H6K3 240 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 K7ENP7 123 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 ABCD4O14678 606 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 RGS16O15492 202 aaPredicted RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 PRKYO43930 277 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 GPX5O75715 221 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 NDUFB10O96000 172 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 HOXD4P09016 255 aaPredicted RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 ATP1B2P14415 290 aaPredicted RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 BCL3P20749 454 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 PRKXP51817 358 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 KLRC3Q07444 240 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 SLC15A2Q16348 729 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 SSX2Q16385 188 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 PRAMEF20Q5VT98 475 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 ADAM5Q6NVV9 412 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 EGFL6Q8IUX8 553 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 IL4I1Q96RQ9 567 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 TBX15Q96SF7 602 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 SLC35A5Q9BS91 424 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 B3GNT2Q9NY97 397 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 SLC7A8Q9UHI5 535 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 PRPF19Q9UMS4 504 aaKnown RBP4.28□□□□□ -1.72
SDHB-205ENST00000475506 NPTNQ9Y639 398 aa4.28□□□□□ -1.72
SDHB-205ENST00000475506 EFCAB7A8K855 629 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 KIF2AO00139 706 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 HAS3O00219 553 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 PI15O43692 258 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 CXCL13O43927 109 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GALR3O60755 368 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 ATP5LO75964 103 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 LYPD3O95274 346 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GJB5O95377 273 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 ASGR1P07306 291 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GALP22466 123 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 IGHV1-2P23083 117 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GNA11P29992 359 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 HNRNPH3P31942 346 aaKnown RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 RDXP35241 583 aaKnown RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 LEPP41159 167 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 MAP3K8P41279 467 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 CDK16Q00536 496 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 KRTAP1-1Q07627 177 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 TGM3Q08188 693 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GRB7Q14451 532 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 RCN1Q15293 331 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 KLHL22Q53GT1 634 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 HIPK1Q86Z02 1210 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 NAXDQ8IW45 347 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 MCOLN2Q8IZK6 566 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 OR2L3Q8NG85 312 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 OR1L6Q8NGR2 347 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 MAGEE2Q8TD90 523 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 PAQR8Q8TEZ7 354 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 PSMG2Q969U7 264 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 EFHD2Q96C19 240 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 NOL4LQ96MY1 436 aaPredicted RBP4.27□□□□□ -1.73
SDHB-205ENST00000475506 ZNF599Q96NL3 588 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 FMO2Q99518 471 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 MCHR1Q99705 422 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 VGLL1Q99990 258 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 GLRX2Q9NS18 164 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 RAB20Q9NX57 234 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 SPRR3Q9UBC9 169 aa4.27□□□□□ -1.73
SDHB-205ENST00000475506 WDR19Q8NEZ3 1342 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 SERTM2A0A1B0GWG4 89 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 A0A1W2PPV9 198 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 HEATR9A2RTY3 570 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 SRRM5B3KS81 715 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 POLR2DO15514 142 aaKnown RBP4.26□□□□□ -1.73
SDHB-205ENST00000475506 PHF1O43189 567 aaPredicted RBP4.26□□□□□ -1.73
SDHB-205ENST00000475506 CACNG3O60359 315 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 PFKFB2O60825 505 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 KBTBD11O94819 623 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 CLDN9O95484 217 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 CST1P01037 141 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 CRYGBP07316 175 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 FGF9P31371 208 aaPredicted RBP4.26□□□□□ -1.73
SDHB-205ENST00000475506 IST1P53990 364 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 OGDHQ02218 1023 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 PAX2Q02962 417 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 ISXQ2M1V0 245 aa4.26□□□□□ -1.73
SDHB-205ENST00000475506 C1orf185Q5T7R7 199 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms