RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 P4HTMQ9NXG6 502 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 BLOC1S6Q9UL45 172 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 RNF6Q9Y252 685 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 PTPRZ1P23471 2315 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-210ENST00000475329 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 A0A087WUJ7 227 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 UNC119BA6NIH7 251 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ELOA3DA6NLF2 546 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-210ENST00000475329 TP53I11O14683 189 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 NUDT14O95848 222 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ITPKBP27987 946 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 SOX3P41225 446 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 SSR4P51571 173 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 SUMO3P55854 103 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-210ENST00000475329 MLF1P58340 268 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 C17orf67Q0P5P2 114 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 CHAF1BQ13112 559 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 CDK5R2Q13319 367 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 APOFQ13790 326 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF791Q3KP31 576 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ELOA3BQ3SY89 546 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 TMEM236Q5W0B7 351 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 C12orf73Q69YU5 71 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 TMPRSS7Q7RTY8 843 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
TRAF4-210ENST00000475329 KIF18BQ86Y91 864 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ENTHD1Q8IYW4 607 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ARMC10Q8N2F6 343 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 CLDN22Q8N7P3 220 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 TSPAN14Q8NG11 270 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ELOA3Q8NG57 546 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 OR10G3Q8NGC4 313 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 OSTF1Q92882 214 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 KIAA1143Q96AT1 154 aaPredicted RBP12.54□□□□□ -0.4
TRAF4-210ENST00000475329 BPIFA2Q96DR5 249 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 DSN1Q9H410 356 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 CDCP1Q9H5V8 836 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 METTL7AQ9H8H3 244 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 C12orf10Q9HB07 376 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 SLC25A19Q9HC21 320 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 HHATLQ9HCP6 504 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 ICAM5Q9UMF0 924 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 SPEGQ15772 3267 aa12.54□□□□□ -0.4
TRAF4-210ENST00000475329 TRIM64A6NGJ6 449 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 EFCAB9A8MZ26 197 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 SLC1A7O00341 560 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ADAM10O14672 748 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GNB5O14775 395 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GMFGO60234 142 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 MPZL2O60487 215 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 CDC40O60508 579 aaKnown RBP eCLIP12.53□□□□□ -0.49e-6■■■□□ 15.9
TRAF4-210ENST00000475329 SMNDC1O75940 238 aaKnown RBP eCLIP12.53□□□□□ -0.43e-7■■■■□ 24.8
TRAF4-210ENST00000475329 SERPINA7P05543 415 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 IGFBP1P08833 259 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 CCDC159P0C7I6 412 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GP1BBP13224 206 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 SLC1A3P43003 542 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ID4P47928 161 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 SMSP52788 366 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GAS1P54826 345 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GABARAPL2P60520 117 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 TEKQ02763 1124 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ATP1A4Q13733 1029 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 CASP12Q6UXS9 341 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 TMPRSS11FQ6ZWK6 438 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ATG4DQ86TL0 474 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 DUSP19Q8WTR2 217 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF566Q969W8 418 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 IP6K3Q96PC2 410 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 DPH1Q9BZG8 443 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 SLC19A3Q9BZV2 496 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 EGLN3Q9H6Z9 239 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 GPN2Q9H9Y4 310 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ASCL3Q9NQ33 180 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 MEPEQ9NQ76 525 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 SDHAF3Q9NRP4 125 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 RASSF1Q9NS23 344 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 C20orf141Q9NUB4 165 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 TBC1D23Q9NUY8 699 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 PPP4R1LQ9P1A2 415 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 MRPS18BQ9Y676 258 aaKnown RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 CDH10Q9Y6N8 788 aa12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ZFHX2Q9C0A1 2572 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF292O60281 2723 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 A0A087WXM4 84 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ANKUB1A6NFN9 424 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ENO4A6NNW6 628 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 C17orf51A8MQB3 221 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 CLPTM1O96005 669 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 SAGP10523 405 aaPredicted RBP12.52□□□□□ -0.41
TRAF4-210ENST00000475329 ATP6V1B1P15313 513 aa12.52□□□□□ -0.41
TRAF4-210ENST00000475329 MAKP20794 623 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms