RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 APOOLQ6UXV4 268 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 GRINAQ7Z429 371 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 COMTD1Q86VU5 262 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 RNF113BQ8IZP6 322 aaKnown RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ZADH2Q8N4Q0 377 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 AMER2Q8N7J2 671 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 GNPDA2Q8TDQ7 276 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM239Q8WW34 195 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 NRG4Q8WWG1 115 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 CYGBQ8WWM9 190 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 PSMF1Q92530 271 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 GTPBP3Q969Y2 492 aaKnown RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 DHRS1Q96LJ7 313 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 PRR14Q9BWN1 585 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 RNF32Q9H0A6 362 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 RIBC2Q9H4K1 309 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 NTN4Q9HB63 628 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ACER3Q9NUN7 267 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 MED11Q9P086 117 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 NTNG1Q9Y2I2 539 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 PCDHGB6Q9Y5F9 930 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 KCNMB2Q9Y691 235 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 SH3PXD2BA1X283 911 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 G3V3Y1 287 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 H3BN98 237 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 FFAR1O14842 300 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 SNPHO15079 494 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 CBR3O75828 277 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 SAGP10523 405 aaPredicted RBP9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 IFI30P13284 250 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 POU2F1P14859 743 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 PRKACGP22612 351 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 GDF1P27539 372 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 TACR3P29371 465 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 CD96P40200 585 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 APOBEC1P41238 236 aaKnown RBP9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 EIF1P41567 113 aaKnown RBP9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 HMGA2P52926 109 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 AQP4P55087 323 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 DSCR4P56555 118 aaPredicted RBP9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 NUP107P57740 925 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 IQCCQ4KMZ1 466 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 RAET1LQ5VY80 246 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 BORAQ6PGQ7 559 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 C5orf46Q6UWT4 87 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 MBOAT2Q6ZWT7 520 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 GALNT5Q7Z7M9 940 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 EPHX4Q8IUS5 362 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 DHRSXQ8N5I4 330 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 OR9Q2Q8NGE9 314 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 OR52L1Q8NGH7 329 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 OR4C15Q8NGM1 316 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC7A13Q8TCU3 470 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM255BQ8WV15 326 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 DDIT4LQ96D03 193 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 ARSGQ96EG1 525 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 FEVQ99581 238 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 WFDC6Q9BQY6 131 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 ARHGAP9Q9BRR9 750 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 PRRG3Q9BZD7 231 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC19A3Q9BZV2 496 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 UCK2Q9BZX2 261 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 SMURF2Q9HAU4 748 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 C12orf10Q9HB07 376 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 VNN3Q9NY84 501 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 USE1Q9NZ43 259 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 ICAM5Q9UMF0 924 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 WASF3Q9UPY6 502 aa9.36□□□□□ -0.91
PRPF38A-202ENST00000474048 DMXL1Q9Y485 3027 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 IGLV3-32A0A0A0MS00 114 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 TRAV17A0A0B4J275 112 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 HTR3EA5X5Y0 456 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 OIP5O43482 229 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 BCAS1O75363 584 aaPredicted RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 AHSA1O95433 338 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 HIST1H2ABP04908 130 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 ALPLP05186 524 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 TFPIP10646 304 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 HK1P19367 917 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 WT1P19544 449 aaPredicted RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 CCNA2P20248 432 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 TCEA1P23193 301 aaKnown RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 DPP4P27487 766 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 DNASE1L1P49184 302 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 MAP2K6P52564 334 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 GPR85P60893 370 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 CRYZQ08257 329 aaKnown RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 COX10Q12887 443 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF766Q5HY98 468 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF468Q5VIY5 522 aaPredicted RBP9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 TTC23Q5W5X9 447 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 SPINK14Q6IE38 97 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 KRT80Q6KB66 452 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC25A25Q6KCM7 469 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
PRPF38A-202ENST00000474048 C3orf33Q6P1S2 294 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms