RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 PGCP20142 388 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 SELENBP1Q13228 472 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 SNTB1Q13884 538 aaKnown RBP16.98■□□□□ 0.31
PTCD3-210ENST00000473829 SGCBQ16585 318 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 FBXL19-AS1Q494R0 122 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 HBMQ6B0K9 141 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 VWA1Q6PCB0 445 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 PLEKHM3Q6ZWE6 761 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 CMIPQ8IY22 773 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 PEX5LQ8IYB4 626 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 DPP10Q8N608 796 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 ATP6V1C2Q8NEY4 427 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 OR52P1PQ8NH57 321 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 C10orf82Q8WW14 230 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 PMM1Q92871 262 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 SRXN1Q9BYN0 137 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 SAR1AQ9NR31 198 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 ACER3Q9NUN7 267 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 RLIMQ9NVW2 624 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 KLHL14Q9P2G3 628 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF443Q9Y2A4 671 aaPredicted RBP16.98■□□□□ 0.31
PTCD3-210ENST00000473829 NDUFAF1Q9Y375 327 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 CHST2Q9Y4C5 530 aa16.98■□□□□ 0.31
PTCD3-210ENST00000473829 ANGPT2O15123 496 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 ARAFP10398 606 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 GPX2P18283 190 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 EEF1A1P68104 462 aaKnown RBP16.97■□□□□ 0.31
PTCD3-210ENST00000473829 SELPLGQ14242 412 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 GUSBP1Q15486 140 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 RUNDC3AQ59EK9 446 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 GCNT6Q5T4J0 391 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 PPP4R4Q6NUP7 873 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 NFKBIDQ8NI38 313 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 TSPEARQ8WU66 669 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 CCDC106Q9BWC9 280 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 RSPO3Q9BXY4 272 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-210ENST00000473829 BCL2L10Q9HD36 194 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 APCP25054 2843 aa16.97■□□□□ 0.31
PTCD3-210ENST00000473829 ABCA12Q86UK0 2595 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 A0A0G2JPF8 293 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 CDHR4A6H8M9 788 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 HNRNPCL2B2RXH8 293 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 HNRNPCL3B7ZW38 293 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 SYT5O00445 386 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 HNRNPCL1O60812 293 aaKnown RBP16.96■□□□□ 0.31
PTCD3-210ENST00000473829 HNRNPCL4P0DMR1 293 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 PPIBP23284 216 aaKnown RBP16.96■□□□□ 0.31
PTCD3-210ENST00000473829 UQCRC1P31930 480 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 KIR2DL2P43627 348 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-210ENST00000473829 SIRPAP78324 504 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 MERTKQ12866 999 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 KLF10Q13118 480 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 TMEM176BQ3YBM2 270 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-210ENST00000473829 LIN52Q52LA3 116 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 OR2A2Q6IF42 318 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 C3orf33Q6P1S2 294 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 LUZP2Q86TE4 346 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 CLIP4Q8N3C7 705 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 ZNF563Q8TA94 476 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 TMEM234Q8WY98 164 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 OSTF1Q92882 214 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 RNASE6Q93091 150 aaKnown RBP16.96■□□□□ 0.31
PTCD3-210ENST00000473829 CTPS2Q9NRF8 586 aa16.96■□□□□ 0.31
PTCD3-210ENST00000473829 CSMD2Q7Z408 3487 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 A0A1W2PNR3 127 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 TMEM247A6NEH6 219 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 PGM3O95394 542 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CRHP06850 196 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 THBS1P07996 1170 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 GKN3PP0CG01 181 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 FCGR2AP12318 317 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 IDH2P48735 452 aaKnown RBP16.95■□□□□ 0.3
PTCD3-210ENST00000473829 MTPNP58546 118 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 EPS8Q12929 822 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 NFYCQ13952 458 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 GNA13Q14344 377 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CAPRIN1Q14444 709 aaKnown RBP16.95■□□□□ 0.3
PTCD3-210ENST00000473829 ADRM1Q16186 407 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 ZNF239Q16600 458 aaKnown RBP16.95■□□□□ 0.3
PTCD3-210ENST00000473829 RNF220Q5VTB9 566 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 PRAMEF8Q5VWM4 474 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 PRAMEF7Q5VXH5 474 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 BTLAQ7Z6A9 289 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CNEP1R1Q8N9A8 125 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 BBS10Q8TAM1 723 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 STARD4Q96DR4 205 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 ANKRD27Q96NW4 1050 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CGREF1Q99674 301 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 PAQR5Q9NXK6 330 aaPredicted RBP16.95■□□□□ 0.3
PTCD3-210ENST00000473829 PACSIN3Q9UKS6 424 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 MCTS1Q9ULC4 181 aaKnown RBP16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CLEC4AQ9UMR7 237 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 NOTCH2Q04721 2471 aa16.95■□□□□ 0.3
PTCD3-210ENST00000473829 CSMD1Q96PZ7 3565 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 GJE1A6NN92 205 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 EVPLLA8MZ36 301 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 PABPC4LP0CB38 370 aaKnown RBP16.94■□□□□ 0.3
PTCD3-210ENST00000473829 KLK2P20151 261 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 CARD18P57730 90 aa16.94■□□□□ 0.3
PTCD3-210ENST00000473829 CDK6Q00534 326 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms