RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 GSNP06396 782 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 KITP10721 976 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 EPHA3P29320 983 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 CHRNEQ04844 493 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 SELENBP1Q13228 472 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 BEND4Q6ZU67 534 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 MAVSQ7Z434 540 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 ZNF619Q8N2I2 560 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 ANKFN1Q8N957 763 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 FAM71CQ8NEG0 241 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 S100PBPQ96BU1 408 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 ROPN1LQ96C74 230 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 PLPPR2Q96GM1 343 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 OR5B2Q96R09 309 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 PSD2Q9BQI7 771 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 SLC35A5Q9BS91 424 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 SLC6A13Q9NSD5 602 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 AIG1Q9NVV5 245 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 PRSS50Q9UI38 385 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 PCDHGB4Q9UN71 923 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 FREM1Q5H8C1 2179 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 ACANP16112 2415 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 HMGN4O00479 90 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 RYKP34925 604 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 SYPL1Q16563 259 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 Q5PR19 223 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 COX20Q5RI15 118 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 TMEM201Q5SNT2 666 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 ANXA8L1Q5VT79 327 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 OGFOD2Q6N063 350 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 PLEKHM3Q6ZWE6 761 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 RNF130Q86XS8 419 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
USP40-212ENST00000473191 IGFBPL1Q8WX77 278 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 ZNF75CPQ92670 426 aaPredicted RBP14.81□□□□□ -0.04
USP40-212ENST00000473191 NEURL3Q96EH8 262 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 PERPQ96FX8 193 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 REXO5Q96IC2 774 aaKnown RBP14.81□□□□□ -0.04
USP40-212ENST00000473191 CCL19Q99731 98 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 SAP130Q9H0E3 1048 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 WDR45Q9Y484 360 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 GPR45Q9Y5Y3 372 aa14.81□□□□□ -0.04
USP40-212ENST00000473191 GJE1A6NN92 205 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 AP3D1O14617 1153 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 SMPD2O60906 423 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 SNNO75324 88 aaPredicted RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 PRKD3O94806 890 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 SOX30O94993 753 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 AK1P00568 194 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 ADAP00813 363 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 CHRM4P08173 479 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 PSMB1P20618 241 aaKnown RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 SLC7A1P30825 629 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 S100A3P33764 101 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 CHI3L1P36222 383 aaPredicted RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 RAC3P60763 192 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 MERTKQ12866 999 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 RNPS1Q15287 305 aaKnown RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 MAPK11Q15759 364 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 GPAT3Q53EU6 434 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 HHATQ5VTY9 493 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 GTF2IRD2BQ6EKJ0 949 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 SEZ6L2Q6UXD5 910 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 ZNF704Q6ZNC4 412 aaPredicted RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 GTF2IRD2Q86UP8 949 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 LILRB1Q8NHL6 650 aaPredicted RBP14.8□□□□□ -0.04
USP40-212ENST00000473191 NEUROG1Q92886 237 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 ARL5BQ96KC2 179 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 CCDC115Q96NT0 180 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 CTPS2Q9NRF8 586 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 EXD2Q9NVH0 621 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 GPR52Q9Y2T5 361 aa14.8□□□□□ -0.04
USP40-212ENST00000473191 CCDC154A6NI56 674 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 DSCAMO60469 2012 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 RAMP1O60894 148 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 FESP07332 822 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 YES1P07947 543 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 NTF4P34130 210 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 DIO1P49895 249 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 TAB1Q15750 504 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 SLC9B1Q4ZJI4 515 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 BEX5Q5H9J7 111 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 SFRP5Q5T4F7 317 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 C3orf33Q6P1S2 294 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 EIF3MQ7L2H7 374 aaKnown RBP14.79□□□□□ -0.04
USP40-212ENST00000473191 STK32CQ86UX6 486 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 CNOT9Q92600 299 aaKnown RBP14.79□□□□□ -0.04
USP40-212ENST00000473191 C18orf12Q96KH6 178 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 Q96MF0 132 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 PANX1Q96RD7 426 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 PIP5K1AQ99755 562 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 CCDC106Q9BWC9 280 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 SETD2Q9BYW2 2564 aaPredicted RBP14.79□□□□□ -0.04
USP40-212ENST00000473191 OR11A1Q9GZK7 315 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 SLC38A1Q9H2H9 487 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 BCO1Q9HAY6 547 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 TIGARQ9NQ88 270 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 ACER3Q9NUN7 267 aa14.79□□□□□ -0.04
USP40-212ENST00000473191 BTNL2Q9UIR0 455 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms