RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TMEM101Q96IK0 257 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 EBF4Q9BQW3 602 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 THUMPD2Q9BTF0 503 aaKnown RBP3.69□□□□□ -1.82
CLK1-209ENST00000472679 NANOGQ9H9S0 305 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 SIGLEC8Q9NYZ4 499 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 UGT2A1Q9Y4X1 527 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 TTC21BQ7Z4L5 1316 aa3.69□□□□□ -1.82
CLK1-209ENST00000472679 PSMB11A5LHX3 300 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 G3V4G9 280 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 PRKYO43930 277 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ECI2O75521 394 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 BBOX1O75936 387 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 LALBAP00709 142 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 PRKXP51817 358 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 HSPA2P54652 639 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ARMCX2Q7L311 632 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ARCQ7LC44 396 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 TPRA1Q86W33 373 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 MTURNQ8N3F0 131 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 SVOPLQ8N434 492 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 C20orf203Q8NBC4 194 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ZNF740Q8NDX6 193 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 OR10T2Q8NGX3 314 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 OR56B4Q8NH76 319 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 FBXO30Q8TB52 745 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 RAET1EQ8TD07 263 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 FAM3CQ92520 227 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 PGLYRP4Q96LB8 373 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 NAT10Q9H0A0 1025 aaKnown RBP3.68□□□□□ -1.82
CLK1-209ENST00000472679 TMEM117Q9H0C3 514 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 NXF5Q9H1B4 397 aaKnown RBP3.68□□□□□ -1.82
CLK1-209ENST00000472679 RHBGQ9H310 441 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 NARFLQ9H6Q4 476 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 SH2D2AQ9NP31 389 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 HPF1Q9NWY4 346 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 ERVW-1Q9UQF0 538 aa3.68□□□□□ -1.82
CLK1-209ENST00000472679 PLEKHG1Q9ULL1 1385 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 PPIAL4DF5H284 164 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 TRAF3IP2O43734 574 aaPredicted RBP3.67□□□□□ -1.82
CLK1-209ENST00000472679 UGT2B17O75795 530 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 DRD5P21918 477 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 PAX7P23759 505 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 BIDP55957 195 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 NUP107P57740 925 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 TIMM10P62072 90 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 CHRNB3Q05901 458 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 CCDC173Q0VFZ6 552 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 PYHIN1Q6K0P9 492 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 FAM71F2Q6NXP2 309 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 BLOC1S2Q6QNY1 142 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 ACOT1Q86TX2 421 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 VRK2Q86Y07 508 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 MKXQ8IYA7 352 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 LINC01555Q8NAE3 123 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 SPRYD4Q8WW59 207 aaPredicted RBP3.67□□□□□ -1.82
CLK1-209ENST00000472679 RPUSD4Q96CM3 377 aaKnown RBP3.67□□□□□ -1.82
CLK1-209ENST00000472679 NXF3Q9H4D5 531 aaKnown RBP3.67□□□□□ -1.82
CLK1-209ENST00000472679 ZNF385DQ9H6B1 395 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 CDH10Q9Y6N8 788 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 CDC42BPBQ9Y5S2 1711 aa3.67□□□□□ -1.82
CLK1-209ENST00000472679 MFN2O95140 757 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 EPB41P11171 864 aaKnown RBP3.66□□□□□ -1.82
CLK1-209ENST00000472679 CA8P35219 290 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 CTRLP40313 264 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 AP3M2P53677 418 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 CSNK1G2P78368 415 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 ZNF658BQ4V348 819 aaPredicted RBP3.66□□□□□ -1.82
CLK1-209ENST00000472679 CCDC137Q6PK04 289 aaKnown RBP3.66□□□□□ -1.82
CLK1-209ENST00000472679 ACOT7LQ6ZUV0 252 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 RNF175Q8N4F7 328 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 CHCHD10Q8WYQ3 142 aaPredicted RBP3.66□□□□□ -1.82
CLK1-209ENST00000472679 TBX15Q96SF7 602 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 RIT2Q99578 217 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 GAL3ST1Q99999 423 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 AIPL1Q9NZN9 384 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 PRO0461Q9UI25 63 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 LAMP5Q9UJQ1 280 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 LTBP1Q14766 1721 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 RLFQ13129 1914 aa3.66□□□□□ -1.82
CLK1-209ENST00000472679 TRIM49D1C9J1S8 452 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 RS1O15537 224 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 NPIPB7O75200 414 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 ZNF780AO75290 641 aaPredicted RBP3.65□□□□□ -1.83
CLK1-209ENST00000472679 H2BFMP0C1H6 154 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 RBMY1CP0DJD4 496 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 KRT13P13646 458 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 POLR2EP19388 210 aaKnown RBP3.65□□□□□ -1.83
CLK1-209ENST00000472679 UQCRC2P22695 453 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 HTR1EP28566 365 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 LEPP41159 167 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 CSTF1Q05048 431 aaKnown RBP3.65□□□□□ -1.83
CLK1-209ENST00000472679 TP53I3Q53FA7 332 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 DNAJC21Q5F1R6 531 aaKnown RBP3.65□□□□□ -1.83
CLK1-209ENST00000472679 RIPPLY2Q5TAB7 128 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 SLC38A6Q8IZM9 456 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 CLDN19Q8N6F1 224 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 ZNF433Q8N7K0 673 aaPredicted RBP3.65□□□□□ -1.83
CLK1-209ENST00000472679 GPATCH11Q8N954 259 aa3.65□□□□□ -1.83
CLK1-209ENST00000472679 OR10A7Q8NGE5 316 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms