RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ARFGEF3Q5TH69 2177 aa16.6■□□□□ 0.25
SORT1-203ENST00000471996 TGP01266 2768 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 ETV2O00321 342 aaPredicted RBP16.59■□□□□ 0.25
SORT1-203ENST00000471996 NTF4P34130 210 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 SERPINF1P36955 418 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 RNF144AP50876 292 aaPredicted RBP16.59■□□□□ 0.25
SORT1-203ENST00000471996 DVL1P1P54792 670 aaPredicted RBP16.59■□□□□ 0.25
SORT1-203ENST00000471996 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 CAV1Q03135 178 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 LGALS3BPQ08380 585 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 KLHL26Q53HC5 615 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 EXOSC6Q5RKV6 272 aaKnown RBP16.59■□□□□ 0.25
SORT1-203ENST00000471996 ZNF678Q5SXM1 525 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 ABLIM2Q6H8Q1 611 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 C3orf33Q6P1S2 294 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 ZCCHC12Q6PEW1 402 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 TMPPEQ6ZT21 453 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 IKBIPQ70UQ0 350 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 SZRD1Q7Z422 152 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 FAM216AQ8WUB2 273 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 C16orf58Q96GQ5 468 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 BTBD2Q9BX70 525 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 AMDHD2Q9Y303 409 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 SAR1BQ9Y6B6 198 aa16.59■□□□□ 0.25
SORT1-203ENST00000471996 ZNF716A6NP11 495 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 H3BNH8 94 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 PDLIM1O00151 329 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 PDPK1O15530 556 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 RAD51CO43502 376 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 ENO1P06733 434 aaKnown RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 DIO1P49895 249 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 POU6F2P78424 691 aaPredicted RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 MTDHQ86UE4 582 aaKnown RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 ZNF527Q8NB42 609 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 TOR1AIP2Q8NFQ8 470 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 FAM76AQ8TAV0 307 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 ARL8AQ96BM9 186 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 OTUB1Q96FW1 271 aaPredicted RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 KCNA7Q96RP8 456 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 HOXD1Q9GZZ0 328 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 IQCGQ9H095 443 aaKnown RBP16.58■□□□□ 0.24
SORT1-203ENST00000471996 SLC17A5Q9NRA2 495 aa16.58■□□□□ 0.24
SORT1-203ENST00000471996 TRRAPQ9Y4A5 3859 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 CCDC151A5D8V7 595 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 B9A039 149 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 GTPBP1O00178 669 aaKnown RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 SLU7O95391 586 aaKnown RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 CREB1P16220 341 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 CSNK2A1P68400 391 aaPredicted RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 QPRTQ15274 297 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 NDUFAF6Q330K2 333 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.57■□□□□ 0.24
SORT1-203ENST00000471996 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 UGT2A3Q6UWM9 527 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 ZDHHC24Q6UX98 284 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 C1orf162Q8NEQ5 155 aaPredicted RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 OR52E4Q8NGH9 312 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 OR5W2Q8NH69 310 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 ZNF418Q8TF45 676 aaPredicted RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 CIDECQ96AQ7 238 aaPredicted RBP16.57■□□□□ 0.24
SORT1-203ENST00000471996 TMEM237Q96Q45 408 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 SNX18Q96RF0 628 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 RAB1BQ9H0U4 201 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 GIN1Q9NXP7 522 aa16.57■□□□□ 0.24
SORT1-203ENST00000471996 SULT2B1O00204 365 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 GPR171O14626 319 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 MRPL33O75394 65 aaKnown RBP16.56■□□□□ 0.24
SORT1-203ENST00000471996 ATP6V1C1P21283 382 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 PPOXP50336 477 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 IDH3GP51553 393 aaPredicted RBP16.56■□□□□ 0.24
SORT1-203ENST00000471996 PKNOX1P55347 436 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 SCGB2A2Q13296 93 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 TIGD2Q4W5G0 525 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 TEX35Q5T0J7 233 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 ANKRD26P1Q6NSI1 321 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 NOXRED1Q6NXP6 359 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 SPATA19Q7Z5L4 167 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 ZFP28Q8NHY6 868 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 JADE3Q92613 823 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 EGLN2Q96KS0 407 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 QRSL1Q9H0R6 528 aaKnown RBP16.56■□□□□ 0.24
SORT1-203ENST00000471996 DUSP22Q9NRW4 184 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 CA10Q9NS85 328 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 DCTN4Q9UJW0 460 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 STK38LQ9Y2H1 464 aa16.56■□□□□ 0.24
SORT1-203ENST00000471996 ESPNB1AK53 854 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 TRIM77I1YAP6 450 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 DAOP14920 347 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 PRPS1P60891 318 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 DEFA6Q01524 100 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 LCP2Q13094 533 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 EFNB3Q15768 340 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 IMPG1Q17R60 797 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 C9orf135Q5VTT2 229 aa16.55■□□□□ 0.24
SORT1-203ENST00000471996 PEG10Q86TG7 708 aaKnown RBP16.55■□□□□ 0.24
SORT1-203ENST00000471996 RFWD2Q8NHY2 731 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms