RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 MYLIPQ8WY64 445 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 UPRTQ96BW1 309 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SORBS1Q9BX66 1292 aaKnown RBP12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SC5DO75845 299 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SCGB1D1O95968 90 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DRD1P21728 446 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HRH2P25021 359 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KDELR2P33947 212 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 VEGFCP49767 419 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MC2RQ01718 297 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GAB1Q13480 694 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EXOSC7Q15024 291 aaKnown RBP12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF679Q8IYX0 411 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC35B2Q8TB61 432 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CCDC74AQ96AQ1 378 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 INPP5KQ9BT40 448 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MYADML2A6NDP7 307 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NFKBIEO00221 500 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR7A17O14581 309 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GAAP10253 952 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SSTR4P31391 388 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DAP3P51398 398 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TAS2R20P59543 309 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HOXC5Q00444 222 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 VASNQ6EMK4 673 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR6C1Q96RD1 312 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SSU72Q9NP77 194 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TRAPPC2LH3BP13 241 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PBX1P40424 430 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PIN1Q13526 163 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR7G2Q8NG99 324 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TSPAN10Q9H1Z9 355 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KCNIP2Q9NS61 270 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C20orf202A1L168 122 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OMGP23515 440 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ERVK-25P63136 954 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RAB33AQ14088 237 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DCAF12Q5T6F0 453 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ERMP1Q7Z2K6 904 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 REEP6Q96HR9 211 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 AMDHD1Q96NU7 426 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FEVQ99581 238 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PPIL3Q9H2H8 161 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 STUB1Q9UNE7 303 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 EDDM3BP56851 147 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RTP2Q5QGT7 225 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PRICKLE2Q7Z3G6 844 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 BMFQ96LC9 184 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KRBA1A5PL33 1030 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HOXB5P09067 269 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HOXA1P49639 335 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 P2RY14Q15391 338 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 KIAA1211LQ6NV74 962 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NPY6RQ99463 290 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ARPC5LQ9BPX5 153 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MOB1AQ9H8S9 216 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MTHFD2LQ9H903 347 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 P4HTMQ9NXG6 502 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 HNRNPA1P09651 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RAB3AP20336 220 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CD1CP29017 333 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NKX2-5P52952 324 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SERTAD2Q14140 314 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CD93Q9NPY3 652 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 TRAPPC2LQ9UL33 140 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 C12orf71A8MTZ7 269 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 M0QZ24 198 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MRPL33O75394 65 aaKnown RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZNF280AP59817 542 aaPredicted RBP12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 FADDQ13158 208 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR5D14Q8NGL3 314 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OR13C9Q8NGT0 318 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 S1PR3Q99500 378 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 OLAHQ9NV23 265 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 NLKQ9UBE8 527 aa12.45□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GSRP00390 522 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 CEBPBP17676 345 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 MRPL19P49406 292 aaKnown RBP12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SLC14A1Q13336 389 aa12.44□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SERINC5Q86VE9 423 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms