RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 FAM166BA8MTA8 275 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 FAAHO00519 579 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 GNGT2O14610 69 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 LDLRP01130 860 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 HOXB6P17509 224 aaKnown RBP17.42■□□□□ 0.38
PSPC1-203ENST00000471658 ELAVL4P26378 380 aaKnown RBP17.42■□□□□ 0.38
PSPC1-203ENST00000471658 DPP4P27487 766 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 TOMM20Q15388 145 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 PLEKHN1Q494U1 663 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-203ENST00000471658 RNFT1Q5M7Z0 435 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 WBP2NLQ6ICG8 309 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 WDR88Q6ZMY6 472 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 TMEM179BQ7Z7N9 219 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 NKAIN4Q8IVV8 208 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 PQLC1Q8N2U9 271 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 PIK3C3Q8NEB9 887 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 C9orf43Q8TAL5 461 aaPredicted RBP17.42■□□□□ 0.38
PSPC1-203ENST00000471658 PTGES2Q9H7Z7 377 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 DCLRE1BQ9H816 532 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 LUZP4Q9P127 313 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 RPS6KB2Q9UBS0 482 aa17.42■□□□□ 0.38
PSPC1-203ENST00000471658 TPRP12270 2363 aaKnown RBP17.42■□□□□ 0.38
PSPC1-203ENST00000471658 A0A0B4J2E0 115 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 A0A1B0GX12 115 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 TRAPPC13A5PLN9 417 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 ZIC3O60481 467 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 OR5F1O95221 314 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 ATP6V1G2O95670 118 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 GP1BBP13224 206 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 PRKCAP17252 672 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 SLC1A3P43003 542 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 LSM11P83369 360 aaKnown RBP eCLIP17.41■□□□□ 0.38
PSPC1-203ENST00000471658 PLGLB1Q02325 96 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 FOXF1Q12946 379 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 LAPTM4AQ15012 233 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 PLPPR5Q32ZL2 321 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 COLEC12Q5KU26 742 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF613Q6PF04 617 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 POMZP3Q6PJE2 187 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 ZFP62Q8NB50 900 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-203ENST00000471658 POC1BQ8TC44 478 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 DHRS1Q96LJ7 313 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 BARD1Q99728 777 aaKnown RBP17.41■□□□□ 0.38
PSPC1-203ENST00000471658 PRSS27Q9BQR3 290 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 ADAM19Q9H013 955 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 UBQLN3Q9H347 655 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 RPH3AQ9Y2J0 694 aaPredicted RBP17.41■□□□□ 0.38
PSPC1-203ENST00000471658 PCDHGB6Q9Y5F9 930 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 LYVE1Q9Y5Y7 322 aa17.41■□□□□ 0.38
PSPC1-203ENST00000471658 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 TRBV4-1A0A0J9YWV2 114 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 DEAF1O75398 565 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 GLSO94925 669 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 GADD45GO95257 159 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 H1F0P07305 194 aaKnown RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 CELA3AP09093 270 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 FCGR1AP12314 374 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 HK1P19367 917 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 CCNA2P20248 432 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 GDF1P27539 372 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 TACR3P29371 465 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF41P51814 821 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 DSCR4P56555 118 aaPredicted RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 FOXK2Q01167 660 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 RIPK1Q13546 671 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 NADK2Q4G0N4 442 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 ALG10BQ5I7T1 473 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 FBXW10Q5XX13 1052 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 YRDCQ86U90 279 aaKnown RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 OFCC1Q8IZS5 231 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 TMEM251Q8N6I4 163 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 RELTQ969Z4 430 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 RNPEPL1Q9HAU8 725 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
PSPC1-203ENST00000471658 OSGIN1Q9UJX0 560 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 DKKL1Q9UK85 242 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 LHX6Q9UPM6 363 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 NCKAP5O14513 1909 aa17.4■□□□□ 0.38
PSPC1-203ENST00000471658 TNFRSF11BO00300 401 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 DPM1O60762 260 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 TRAPPC6AO75865 159 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 UQCRBP14927 111 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 PPIAP62937 165 aaKnown RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 ST3GAL3Q11203 375 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 EXOC3L2Q2M3D2 409 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 FGD3Q5JSP0 725 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 ULK3Q6PHR2 472 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 TBPL2Q6SJ96 375 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 ATG4DQ86TL0 474 aaPredicted RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 P3H2Q8IVL5 708 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 HS3ST5Q8IZT8 346 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 OR4C15Q8NGM1 316 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 UBL7Q96S82 380 aaPredicted RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 ZNF703Q9H7S9 590 aaPredicted RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 REEP1Q9H902 201 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 HHATLQ9HCP6 504 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 B3GNT3Q9Y2A9 372 aa17.39■□□□□ 0.38
PSPC1-203ENST00000471658 SAMHD1Q9Y3Z3 626 aaKnown RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 MAGED1Q9Y5V3 778 aaPredicted RBP17.39■□□□□ 0.38
PSPC1-203ENST00000471658 MAP1BP46821 2468 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms