RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SNRNP27Q8WVK2 155 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 RFKQ969G6 155 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC25A46Q96AG3 418 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CLDN23Q96B33 292 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PEX11GQ96HA9 241 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 HS6ST2Q96MM7 605 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CD180Q99467 661 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TIMP4Q99727 224 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 ZNF559Q9BR84 538 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 MED18Q9BUE0 208 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 TBC1D17Q9HA65 648 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SMURF1Q9HCE7 757 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PRTFDC1Q9NRG1 225 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 HCN3Q9P1Z3 774 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 EPHA6Q9UF33 1036 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CA14Q9ULX7 337 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SSR3Q9UNL2 185 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 DOLKQ9UPQ8 538 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PLCL2Q9UPR0 1127 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SIGLEC7Q9Y286 467 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TRAPPC4Q9Y296 219 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TMEM5Q9Y2B1 443 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 YARS2Q9Y2Z4 477 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 CSNK1G3Q9Y6M4 447 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 THADAQ6YHU6 1953 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 COL5A1P20908 1838 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 GOLGA4Q13439 2230 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 MN1Q10571 1320 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 IGHV5-51A0A0C4DH38 117 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 A0A1B0GWA3 101 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TLCD2A6NGC4 264 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 LMO7DNF2Z398 122 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 H0YIG0 161 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CTDSP2O14595 271 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 LRRTM2O43300 516 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TBX1O43435 398 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PRAMEF2O60811 474 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 F12P00748 615 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 IL1AP01583 271 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 DCNP07585 359 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 IFI30P13284 250 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC2A5P22732 501 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 FGF9P31371 208 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 S100A5P33763 92 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 RBM34P42696 430 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 CD97P48960 835 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 EPHA4P54764 986 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 HSD17B7P56937 341 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 NXPH1P58417 271 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SKP1P63208 163 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 PSPHP78330 225 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 BTG2P78543 158 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC13A2Q13183 592 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 ERV3-1Q14264 604 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 UBXN2BQ14CS0 331 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.91□□□□□ -1.46
SPEN-204ENST00000471538 ZSWIM7Q19AV6 140 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 RPL13AP3Q6NVV1 102 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 HSDL2Q6YN16 418 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 MEPCEQ7L2J0 689 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 CXXC5Q7LFL8 322 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 C11orf74Q86VG3 221 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC22A16Q86VW1 577 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CPOQ8IVL8 374 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 GID4Q8IVV7 300 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CMIPQ8IY22 773 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC43A2Q8N370 569 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 DEFB119Q8N690 84 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SIRT6Q8N6T7 355 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 RCBTB1Q8NDN9 531 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PSD4Q8NDX1 1056 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 OR9Q1Q8NGQ5 310 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 OR13C2Q8NGS9 318 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 ASB15Q8WXK1 588 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 UFD1Q92890 307 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 RIT1Q92963 219 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 BPIFA2Q96DR5 249 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SPACA7Q96KW9 195 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 ZNF578Q96N58 590 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 DGAT2Q96PD7 388 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SLC38A3Q99624 504 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 KCNS3Q9BQ31 491 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 HCAR1Q9BXC0 346 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TEX12Q9BXU0 123 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 NUAK2Q9H093 628 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SP140LQ9H930 580 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 EXOSC4Q9NPD3 245 aaKnown RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 POLE4Q9NR33 117 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CMC2Q9NRP2 79 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 ERVK13-1Q9NX77 482 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 CRNNQ9UBG3 495 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 PLEKHB1Q9UF11 243 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 KLHL3Q9UH77 587 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 IL20RAQ9UHF4 553 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 MRPS33Q9Y291 106 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms