RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
HSPG2-208ENST00000471322 CCDC160A6NGH7 325 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 RGS10O43665 173 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 OR6B1O95007 311 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 CSTAP01040 98 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 UMODP07911 640 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 ENDOUP21128 410 aaKnown RBP16.03■□□□□ 0.16
HSPG2-208ENST00000471322 FOLR3P41439 243 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 GIPRP48546 466 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 SMSP52788 366 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 C12orf73Q69YU5 71 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 ANKRD37Q7Z713 158 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 NRMQ8IXM6 262 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 CDK20Q8IZL9 346 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 OR8J1Q8NGP2 316 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 OSTF1Q92882 214 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 MYDGFQ969H8 173 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 GAL3ST4Q96RP7 486 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 SPSB2Q99619 263 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 TEX12Q9BXU0 123 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 PRRG3Q9BZD7 231 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 WWTR1Q9GZV5 400 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 SELENONQ9NZV5 590 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 TMEM5Q9Y2B1 443 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 CEPT1Q9Y6K0 416 aa16.03■□□□□ 0.16
HSPG2-208ENST00000471322 MASP2O00187 686 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 SCDO00767 359 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 SOX14O95416 240 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TP53P04637 393 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TBXA2RP21731 343 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 RBM34P42696 430 aaKnown RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 ACAA2P42765 397 aaKnown RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 CHAF1BQ13112 559 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 NEDD8Q15843 81 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TBR1Q16650 682 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 CNPY1Q3B7I2 92 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TMEM236Q5W0B7 351 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 PRSS48Q7RTY5 328 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 C9orf40Q8IXQ3 194 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 CLDN22Q8N7P3 220 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 OR2Y1Q8NGV0 311 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TEX47Q8TBZ9 253 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TMEM255BQ8WV15 326 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TMEM239Q8WW34 195 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TP53INP1Q96A56 240 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 TMIGD2Q96BF3 282 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 EFHD2Q96C19 240 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 GPA33Q99795 319 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 CCDC90BQ9GZT6 254 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 CXorf56Q9H5V9 222 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 WDR54Q9H977 334 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 SLC25A19Q9HC21 320 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 RPS6KB2Q9UBS0 482 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 C19orf25Q9UFG5 118 aaPredicted RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 PSORS1C1Q9UIG5 152 aa16.02■□□□□ 0.16
HSPG2-208ENST00000471322 PPIEQ9UNP9 301 aaKnown RBP16.02■□□□□ 0.16
HSPG2-208ENST00000471322 A0A0B4J2E0 115 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 A0A1B0GX12 115 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 CLCA1A8K7I4 914 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 H3BSA7 217 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ZNF701M0R085 212 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 KLF4O43474 513 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 CHP2O43745 196 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 LYPD3O95274 346 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 UTS2O95399 124 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 HTR1AP08908 422 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 GPR143P51810 404 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 CDK5Q00535 292 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 PLAURQ03405 335 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 MVKQ03426 396 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 PMS2P3Q13401 168 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 GINS1Q14691 196 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 SMN1Q16637 294 aaKnown RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 FAAH2Q6GMR7 532 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ULK3Q6PHR2 472 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 LANCL3Q6ZV70 420 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 SLC34A3Q8N130 599 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 FAM46AQ96IP4 442 aaKnown RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 SEMA4CQ9C0C4 833 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 EXOSC3Q9NQT5 275 aaKnown RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 PAK1IP1Q9NWT1 392 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ERVK-18Q9QC07 812 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 AASSQ9UDR5 926 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 MED31Q9Y3C7 131 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 SAGE2PA6NJ88 616 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 BCAS1O75363 584 aaPredicted RBP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 REM1O75628 298 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 NGFRP08138 427 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 FAM87AP0C7U9 286 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 IL12BP29460 328 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 COPZ1P61923 177 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 LSM11P83369 360 aaKnown RBP eCLIP16.01■□□□□ 0.15
HSPG2-208ENST00000471322 PRKCDQ05655 676 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 ATP1A4Q13733 1029 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 RAB39AQ14964 217 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 SLC25A30Q5SVS4 291 aa16.01■□□□□ 0.15
HSPG2-208ENST00000471322 XAF1Q6GPH4 301 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms