RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 BPIFA2Q96DR5 249 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 ARSGQ96EG1 525 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 POLDIP3Q9BY77 421 aaKnown RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 PRRG3Q9BZD7 231 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 PLA2G12AQ9BZM1 189 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 RTN4RQ9BZR6 473 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 EGLN3Q9H6Z9 239 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 CCNB1IP1Q9NPC3 277 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 MEPEQ9NQ76 525 aaPredicted RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 RASSF1Q9NS23 344 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 C20orf141Q9NUB4 165 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 PLCXD1Q9NUJ7 323 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 TBC1D23Q9NUY8 699 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 WDR70Q9NW82 654 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 SCN3BQ9NY72 215 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 IL20Q9NYY1 176 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 FARSAQ9Y285 508 aaKnown RBP8.58□□□□□ -1.04
VPS52-216ENST00000471309 TPRKBQ9Y3C4 175 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 NINQ8N4C6 2090 aa8.58□□□□□ -1.04
VPS52-216ENST00000471309 OTOGLQ3ZCN5 2332 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SDK2Q58EX2 2172 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SMIM31A0A1B0GVY4 71 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 EFCAB9A8MZ26 197 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 STMND1H3BQB6 276 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 KPNA4O00629 521 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 CDC42EP2O14613 210 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SCO2O43819 266 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS52-216ENST00000471309 RAD1O60671 282 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 MRPS14O60783 128 aaKnown RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 FAM20BO75063 409 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 HPP00738 406 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 IGFBP1P08833 259 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 ICAM2P13598 275 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 PGCP20142 388 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 MAKP20794 623 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 EEF1B2P24534 225 aaKnown RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 MST1P26927 711 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 FMO3P31513 532 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 OTX2P32243 289 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 DLSTP36957 453 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SLC1A3P43003 542 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 ALDH3B2P48448 385 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 GIPRP48546 466 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 P2RX1P51575 399 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 RPS18P62269 152 aaKnown RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 SLC35A2P78381 396 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 GINS1Q14691 196 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 TMEM201Q5SNT2 666 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 PTCHD4Q6ZW05 846 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 MEX3DQ86XN8 651 aaKnown RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 CCDC103Q8IW40 242 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 DND1Q8IYX4 353 aaKnown RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 BPIFB6Q8NFQ5 453 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 OR8D4Q8NGM9 314 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 OR8J1Q8NGP2 316 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 B4GALNT2Q8NHY0 566 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 IPCEF1Q8WWN9 437 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 UBE2FQ969M7 185 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SPACA9Q96E40 222 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 MS4A3Q96HJ5 214 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 SH3YL1Q96HL8 342 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 NODALQ96S42 347 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 RASL10BQ96S79 203 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 TMEM43Q9BTV4 400 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 DPH1Q9BZG8 443 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 FAM192AQ9GZU8 254 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 DSN1Q9H410 356 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 DUSP21Q9H596 190 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 ZNF160Q9HCG1 818 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 HHATLQ9HCP6 504 aa8.57□□□□□ -1.04
VPS52-216ENST00000471309 PAK1IP1Q9NWT1 392 aaPredicted RBP8.57□□□□□ -1.04
VPS52-216ENST00000471309 IGKV1D-42A0A075B6H8 117 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 IGLV3-32A0A0A0MS00 114 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ANKUB1A6NFN9 424 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ELOA3DA6NLF2 546 aaPredicted RBP8.56□□□□□ -1.04
VPS52-216ENST00000471309 ENO4A6NNW6 628 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 XPNPEP2O43895 674 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 HCN1O60741 890 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ITGA10O75578 1167 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 RCBTB2O95199 551 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 CELA2AP08217 269 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 HTR1AP08908 422 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 CEACAM1P13688 526 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 PTNP21246 168 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SLC9A3P48764 834 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 PCYT1AP49585 367 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 GAS1P54826 345 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 GABREP78334 506 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 C17orf67Q0P5P2 114 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 CHAF1BQ13112 559 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SMN1Q16637 294 aaKnown RBP8.56□□□□□ -1.04
VPS52-216ENST00000471309 PGGHGQ32M88 737 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 ZNF791Q3KP31 576 aaPredicted RBP8.56□□□□□ -1.04
VPS52-216ENST00000471309 ELOA3BQ3SY89 546 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 NADK2Q4G0N4 442 aa8.56□□□□□ -1.04
VPS52-216ENST00000471309 SLC25A30Q5SVS4 291 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms