RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 PACSIN3Q9UKS6 424 aa12.68□□□□□ -0.38
TOP3B-215ENST00000470338 MCTS1Q9ULC4 181 aaKnown RBP12.68□□□□□ -0.38
TOP3B-215ENST00000470338 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 A0A0G2JND7 137 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 MSTNO14793 375 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 ATP8B1O43520 1251 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 HNRNPCL1O60812 293 aaKnown RBP12.67□□□□□ -0.38
TOP3B-215ENST00000470338 ADAM11O75078 769 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 SYNGR4O95473 234 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 CGAP01215 116 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 IL7RP16871 459 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 SFTPDP35247 375 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 KIR2DL3P43628 341 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 PCYT1AP49585 367 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 CRISP3P54108 245 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 SORDQ00796 357 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 TLE4Q04727 773 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 SELENBP1Q13228 472 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 SNTB1Q13884 538 aaKnown RBP12.67□□□□□ -0.38
TOP3B-215ENST00000470338 GNA13Q14344 377 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-215ENST00000470338 VWA1Q6PCB0 445 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 KIF18BQ86Y91 864 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 PEX5LQ8IYB4 626 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 RBM24Q9BX46 236 aaKnown RBP12.67□□□□□ -0.38
TOP3B-215ENST00000470338 PRRG4Q9BZD6 226 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 CCDC134Q9H6E4 229 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 FGFR1OP2Q9NVK5 253 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 DNAJB12Q9NXW2 375 aaKnown RBP12.67□□□□□ -0.38
TOP3B-215ENST00000470338 VAPAQ9P0L0 249 aa12.67□□□□□ -0.38
TOP3B-215ENST00000470338 FREM1Q5H8C1 2179 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CSMD1Q96PZ7 3565 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 BCHEP06276 602 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 NUDT7P0C024 238 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CD8BP10966 210 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 PPIBP23284 216 aaKnown RBP12.66□□□□□ -0.38
TOP3B-215ENST00000470338 RYKP34925 604 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 APOBEC1P41238 236 aaKnown RBP12.66□□□□□ -0.38
TOP3B-215ENST00000470338 GUCY1A3Q02108 690 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 MERTKQ12866 999 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 PRAMEF8Q5VWM4 474 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 PRAMEF7Q5VXH5 474 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 DLEU7Q6UYE1 221 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 PLEKHM3Q6ZWE6 761 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 FAM214BQ7L5A3 538 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 LUZP2Q86TE4 346 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 DPP10Q8N608 796 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CNEP1R1Q8N9A8 125 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 OR52P1PQ8NH57 321 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CPNE4Q96A23 557 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM19Q96HH6 336 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-215ENST00000470338 LURAP1Q96LR2 239 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 ZNF559Q9BR84 538 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CCDC106Q9BWC9 280 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM120AQ9BXJ8 343 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 COQ10BQ9H8M1 238 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 BCL2L10Q9HD36 194 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 GLRX2Q9NS18 164 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 GALNT8Q9NY28 637 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 PRDM4Q9UKN5 801 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 CSMD2Q7Z408 3487 aa12.66□□□□□ -0.38
TOP3B-215ENST00000470338 HRNRQ86YZ3 2850 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 POLQO75417 2590 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 CDHR4A6H8M9 788 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 TMEM247A6NEH6 219 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 FAAHO00519 579 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 SS18L1O75177 396 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 THBS1P07996 1170 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 TROVE2P10155 538 aaKnown RBP eCLIP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 GPX2P18283 190 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 KRTAP10-9P60411 292 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 RAC3P60763 192 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 SIRPAP78324 504 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 MYBPHQ13203 477 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 MRPL2Q5T653 305 aaKnown RBP12.65□□□□□ -0.38
TOP3B-215ENST00000470338 GTF2IRD2BQ6EKJ0 949 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 CGB2Q6NT52 195 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 GTF2IRD2Q86UP8 949 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 VRK2Q86Y07 508 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 C10orf111Q8N326 155 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 ZNF563Q8TA94 476 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 SRXN1Q9BYN0 137 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 PLSCR4Q9NRQ2 329 aa12.65□□□□□ -0.38
TOP3B-215ENST00000470338 SERINC1Q9NRX5 453 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms