RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CTBP2P56545 445 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 PPP3R1P63098 170 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 BTG2P78543 158 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 E2F1Q01094 437 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ALG10BQ5I7T1 473 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 KIAA0895LQ68EN5 471 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ZNF544Q6NX49 715 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ARL9Q6T311 187 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 SSX6Q7RTT6 188 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 CADM2Q8N3J6 435 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 C19orf47Q8N9M1 422 aaKnown RBP13.54□□□□□ -0.24
CBWD3-205ENST00000469687 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 RLN3Q8WXF3 142 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 RIT1Q92963 219 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 RNF31Q96EP0 1072 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 SOSTQ9BQB4 213 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ZNF559Q9BR84 538 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 LRRC61Q9BV99 259 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 SLC22A4Q9H015 551 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 LRRN3Q9H3W5 708 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-205ENST00000469687 PPP1R3EQ9H7J1 279 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 ADGRL4Q9HBW9 690 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 MCCC2Q9HCC0 563 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 POLHQ9Y253 713 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 GRIP1Q9Y3R0 1128 aa13.54□□□□□ -0.24
CBWD3-205ENST00000469687 MEIOCA2RUB1 952 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 FOXS1O43638 330 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 SLC2A5P22732 501 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 KIR2DL3P43628 341 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 HCCSP53701 268 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 CRYZQ08257 329 aaKnown RBP13.53□□□□□ -0.24
CBWD3-205ENST00000469687 GALEQ14376 348 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 OAFQ86UD1 273 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
CBWD3-205ENST00000469687 RCBTB1Q8NDN9 531 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 C17orf47Q8NEP4 570 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 OR5W2Q8NH69 310 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 VSTM2LQ96N03 204 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 COQ7Q99807 217 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 LMF2Q9BU23 707 aaKnown RBP13.53□□□□□ -0.24
CBWD3-205ENST00000469687 ZNF426Q9BUY5 554 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 NEK6Q9HC98 313 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 TMEM5Q9Y2B1 443 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
CBWD3-205ENST00000469687 HTR3EA5X5Y0 456 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 OR5K4A6NMS3 321 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 B4DXG7 233 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.24
CBWD3-205ENST00000469687 SEC14L5O43304 696 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 COQ9O75208 318 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 RGS9O75916 674 aaPredicted RBP13.52□□□□□ -0.24
CBWD3-205ENST00000469687 SHC1P29353 583 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 IFITM2Q01629 132 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 ZNF85Q03923 595 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 IL18Q14116 193 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 ZNF267Q14586 743 aaPredicted RBP13.52□□□□□ -0.24
CBWD3-205ENST00000469687 SF3B4Q15427 424 aaKnown RBP eCLIP13.52□□□□□ -0.24
CBWD3-205ENST00000469687 ARMC6Q6NXE6 501 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 IL20RBQ6UXL0 311 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 Q8N402 240 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 ARL14Q8N4G2 192 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 DTX3Q8N9I9 347 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 OR4C6Q8NH72 309 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 C4orf36Q96KX1 117 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 MAP3K3Q99759 626 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 SLC35A3Q9Y2D2 325 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 CLCA3PQ9Y6N3 262 aa13.52□□□□□ -0.24
CBWD3-205ENST00000469687 SLC22A31A6NKX4 558 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 HCN1O60741 890 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 SBK2P0C263 348 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 GSTT2P0CG29 244 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 GSTT2BP0CG30 244 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 SLC2A2P11168 524 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-205ENST00000469687 MAOAP21397 527 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 EVX1P49640 407 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 OR10A3P58181 314 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 OR12D2P58182 307 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 SLC3A1Q07837 685 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 STX4Q12846 297 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 GXYLT1Q4G148 440 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 IDNKQ5T6J7 187 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 RPL13AP3Q6NVV1 102 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 DEFB119Q8N690 84 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 LRRC17Q8N6Y2 441 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 SDR9C7Q8NEX9 313 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 OR51L1Q8NGJ5 315 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 KIAA1143Q96AT1 154 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-205ENST00000469687 ST6GAL2Q96JF0 529 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 CTRCQ99895 268 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 TRPV5Q9NQA5 729 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 POLE3Q9NRF9 147 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 GPR27Q9NS67 375 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 NPAP1Q9NZP6 1156 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 ZNF221Q9UK13 617 aa13.52□□□□□ -0.25
CBWD3-205ENST00000469687 RIIAD1A6NNX1 92 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms