RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TBL1XR1Q9BZK7 514 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 PLA2G12AQ9BZM1 189 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 LAT2Q9GZY6 243 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 OR52D1Q9H346 318 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 DSN1Q9H410 356 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 FN3KQ9H479 309 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 SMOC1Q9H4F8 434 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 APMAPQ9HDC9 416 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 GPR83Q9NYM4 423 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 DNAJC27Q9NZQ0 273 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 ENPP5Q9UJA9 477 aa8.58□□□□□ -1.04
SMC1A-205ENST00000469129 A0A087WUJ7 227 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ENO4A6NNW6 628 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 VGLL3A8MV65 326 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 KDM4EB2RXH2 506 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ALG1L2C9J202 215 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 KPNA4O00629 521 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SLC22A1O15245 554 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SURF4O15260 269 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NDUFB5O43674 189 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 TLX2O43763 284 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 PRKYO43930 277 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 MAN1A2O60476 641 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 CDC40O60508 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ICOSLGO75144 302 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 BCAS1O75363 584 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 GABARAPO95166 117 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 RAB36O95755 333 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 IGFBP1P08833 259 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ADORA3P0DMS8 318 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NAGAP17050 411 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 PGCP20142 388 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 CCNA2P20248 432 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 PAX7P23759 505 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ABCD3P28288 659 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SLC6A6P31641 620 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 GP2P55259 537 aaKnown RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 RAB40BQ12829 278 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 IRF3Q14653 427 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NCF4Q15080 339 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ANKDD1AQ495B1 522 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SYT14P1Q58G82 188 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ARMC4Q5T2S8 1044 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 RNLSQ5VYX0 342 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ARHGAP11AQ6P4F7 1023 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SMARCD3Q6STE5 483 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 LINC00114Q6XXX2 140 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SHISA6Q6ZSJ9 500 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SLCO6A1Q86UG4 719 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 P2RY8Q86VZ1 359 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ANKRD13BQ86YJ7 626 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NAXDQ8IW45 347 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NFAM1Q8NET5 270 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 PFN4Q8NHR9 129 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SLC22A8Q8TCC7 542 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ZFAND2BQ8WV99 257 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 MR1Q95460 341 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 C3orf49Q96BT1 292 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SGTBQ96EQ0 304 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM80Q96HE8 168 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 LRR1Q96L50 414 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF582Q96NG8 517 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 LMF1Q96S06 567 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 CDC6Q99741 560 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 RHNO1Q9BSD3 238 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 TMEM43Q9BTV4 400 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 FUNDC2Q9BWH2 189 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 MND1Q9BWT6 205 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ULBP3Q9BZM4 244 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 GPN2Q9H9Y4 310 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-205ENST00000469129 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 SLC39A1Q9NY26 324 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 NCDNQ9UBB6 729 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 ICAM5Q9UMF0 924 aa8.57□□□□□ -1.04
SMC1A-205ENST00000469129 FAM186AA6NE01 2351 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 KIF26BQ2KJY2 2108 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TRBV11-1A0A0K0K1C0 115 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 RIIAD1A6NNX1 92 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CDC42EP2O14613 210 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 MYL12BO14950 172 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 RFPL3O75679 317 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 INMTO95050 263 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 IFNGP01579 166 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 STSP08842 583 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF806P0C7X5 589 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 MYL12AP19105 171 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 MAKP20794 623 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 EVI2BP34910 448 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 PEX19P40855 299 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 MAP2K4P45985 399 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CDH11P55287 796 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 SUMO3P55854 103 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 SLC26A5P58743 744 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 LSM11P83369 360 aaKnown RBP eCLIP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 ZNF117Q03924 483 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 CRYZQ08257 329 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 DYNC1I2Q13409 638 aaKnown RBP8.56□□□□□ -1.04
SMC1A-205ENST00000469129 TMED1Q13445 227 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 LSAMPQ13449 338 aa8.56□□□□□ -1.04
SMC1A-205ENST00000469129 C1DQ13901 141 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms