RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 TXNL1O43396 289 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 KLF4O43474 513 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CCNB2O95067 398 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CELA2AP08217 269 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 IGFBP1P08833 259 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 COX6A1P12074 109 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ABCD3P28288 659 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 POU3F4P49335 361 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CHN2P52757 468 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 GPR85P60893 370 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 SSTP61278 116 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 LARS2Q15031 903 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PAPD4Q6PIY7 484 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 NLGN4XQ8N0W4 816 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ELP5Q8TE02 316 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 RNF138Q8WVD3 245 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 SECISBP2Q96T21 854 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PITX2Q99697 317 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 G6PC3Q9BUM1 346 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 NCDNQ9UBB6 729 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PISDQ9UG56 409 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 MASP2O00187 686 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 AP3D1O14617 1153 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PLD2O14939 933 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ABCB7O75027 752 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 ICOSLGO75144 302 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CYP7B1O75881 506 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 CYP4B1P13584 511 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 AGXTP21549 392 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 F8A1P23610 371 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 MMP11P24347 488 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 MST1P26927 711 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 RFX3P48380 749 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 NR0B1P51843 470 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 SLC26A5P58743 744 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 DCAF7P61962 342 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 NPRL3Q12980 569 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 RAPSNQ13702 412 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 BCL2A1Q16548 175 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 FAM205BPQ63HN1 556 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 KIRREL2Q6UWL6 708 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 LINC00114Q6XXX2 140 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PRICKLE2Q7Z3G6 844 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 POGLUT1Q8NBL1 392 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 AQP11Q8NBQ7 271 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 OR2Y1Q8NGV0 311 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 MR1Q95460 341 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 UBE2FQ969M7 185 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 MCHR1Q99705 422 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 PRRX2Q99811 253 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 GPR52Q9Y2T5 361 aa7.58□□□□□ -1.2
BRCA1-208ENST00000468300 FAM32AQ9Y421 112 aaKnown RBP7.58□□□□□ -1.2
BRCA1-208ENST00000468300 LOC400499M0QZD8 3231 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SPAARA0A1B0GVQ0 90 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 B9A039 149 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 PROB1E7EW31 1015 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 FAAHO00519 579 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 FMO6PO60774 539 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 UTS2O95399 124 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 TBXA2RP21731 343 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 OMPP47874 163 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 RPS18P62269 152 aaKnown RBP7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SKP2Q13309 424 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 BLMHQ13867 455 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 OR1Q1Q15612 314 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 GFOD2Q3B7J2 385 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 C1orf94Q6P1W5 598 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ASCL5Q7RTU5 278 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 MEX3DQ86XN8 651 aaKnown RBP7.57□□□□□ -1.2
BRCA1-208ENST00000468300 PARP8Q8N3A8 854 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 PSD4Q8NDX1 1056 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 NUBPLQ8TB37 319 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 CT55Q8WUE5 264 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 TMEM255BQ8WV15 326 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 TRIM63Q969Q1 353 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 TP53INP1Q96A56 240 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ART5Q96L15 291 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 GAL3ST4Q96RP7 486 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF426Q9BUY5 554 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 DGCR6LQ9BY27 220 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 STRADBQ9C0K7 418 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ZNF696Q9H7X3 374 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 IFT22Q9H7X7 185 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 KRT84Q9NSB2 600 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 AASSQ9UDR5 926 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 PCDHGA6Q9Y5G7 932 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 HRH3Q9Y5N1 445 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 CCDC187A0A096LP49 1063 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SERINC4A6NH21 518 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 H3BNH8 94 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 FADS1O60427 444 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 MAN1A2O60476 641 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 UGT2B11O75310 529 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 KLK3P07288 261 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-208ENST00000468300 NGFRP08138 427 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 FTH1P19P0C7X4 201 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 SELLP14151 372 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 ELK4P28324 431 aa7.57□□□□□ -1.2
BRCA1-208ENST00000468300 RGS8P57771 180 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-208ENST00000468300 EIPR1Q53HC9 387 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms