RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
SMC4-207ENST00000467263 AENQ8WTP8 325 aaKnown RBP2.55□□□□□ -2
SMC4-207ENST00000467263 TBX15Q96SF7 602 aa2.55□□□□□ -2
SMC4-207ENST00000467263 SCN2AQ99250 2005 aa2.55□□□□□ -2
SMC4-207ENST00000467263 HSD3B7Q9H2F3 369 aa2.55□□□□□ -2
SMC4-207ENST00000467263 MYO10Q9HD67 2058 aa2.55□□□□□ -2
SMC4-207ENST00000467263 WARS2Q9UGM6 360 aaKnown RBP2.55□□□□□ -2
SMC4-207ENST00000467263 ZNF225Q9UK10 706 aa2.55□□□□□ -2
SMC4-207ENST00000467263 CLCA3PQ9Y6N3 262 aa2.55□□□□□ -2
SMC4-207ENST00000467263 MTCL1Q9Y4B5 1905 aaKnown RBP2.54□□□□□ -2
SMC4-207ENST00000467263 NCAPD2Q15021 1401 aa2.54□□□□□ -2
SMC4-207ENST00000467263 GJE1A6NN92 205 aa2.54□□□□□ -2
SMC4-207ENST00000467263 ZNF780AO75290 641 aaPredicted RBP2.54□□□□□ -2
SMC4-207ENST00000467263 GNA14O95837 355 aa2.54□□□□□ -2
SMC4-207ENST00000467263 LALBAP00709 142 aa2.54□□□□□ -2
SMC4-207ENST00000467263 MMP1P03956 469 aa2.54□□□□□ -2
SMC4-207ENST00000467263 RNH1P13489 461 aaKnown RBP2.54□□□□□ -2
SMC4-207ENST00000467263 COX7A1P24310 79 aa2.54□□□□□ -2
SMC4-207ENST00000467263 HTR1FP30939 366 aa2.54□□□□□ -2
SMC4-207ENST00000467263 GMFBP60983 142 aa2.54□□□□□ -2
SMC4-207ENST00000467263 RAB40BQ12829 278 aa2.54□□□□□ -2
SMC4-207ENST00000467263 GPNMBQ14956 572 aa2.54□□□□□ -2
SMC4-207ENST00000467263 ZNF691Q5VV52 312 aa2.54□□□□□ -2
SMC4-207ENST00000467263 CATSPER4Q7RTX7 472 aa2.54□□□□□ -2
SMC4-207ENST00000467263 DPY19L4Q7Z388 723 aa2.54□□□□□ -2
SMC4-207ENST00000467263 C15orf54Q8N8G6 183 aa2.54□□□□□ -2
SMC4-207ENST00000467263 BLOC1S5Q8TDH9 187 aa2.54□□□□□ -2
SMC4-207ENST00000467263 UCN3Q969E3 161 aa2.54□□□□□ -2
SMC4-207ENST00000467263 RAB7BQ96AH8 199 aa2.54□□□□□ -2
SMC4-207ENST00000467263 PGLYRP4Q96LB8 373 aa2.54□□□□□ -2
SMC4-207ENST00000467263 GAL3ST1Q99999 423 aa2.54□□□□□ -2
SMC4-207ENST00000467263 KLHDC3Q9BQ90 382 aa2.54□□□□□ -2
SMC4-207ENST00000467263 CHRDL1Q9BU40 450 aa2.54□□□□□ -2
SMC4-207ENST00000467263 TREM2Q9NZC2 230 aa2.54□□□□□ -2
SMC4-207ENST00000467263 PRPF19Q9UMS4 504 aaKnown RBP2.54□□□□□ -2
SMC4-207ENST00000467263 SLCO1B1Q9Y6L6 691 aa2.54□□□□□ -2
SMC4-207ENST00000467263 CARMIL1Q5VZK9 1371 aa2.53□□□□□ -2
SMC4-207ENST00000467263 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
SMC4-207ENST00000467263 SNAI2O43623 268 aa2.53□□□□□ -2
SMC4-207ENST00000467263 CA1P00915 261 aaPredicted RBP2.53□□□□□ -2
SMC4-207ENST00000467263 CD80P33681 288 aa2.53□□□□□ -2
SMC4-207ENST00000467263 CAMLGP49069 296 aa2.53□□□□□ -2
SMC4-207ENST00000467263 PLK1P53350 603 aa2.53□□□□□ -2
SMC4-207ENST00000467263 BIDP55957 195 aa2.53□□□□□ -2
SMC4-207ENST00000467263 NUCB2P80303 420 aa2.53□□□□□ -2
SMC4-207ENST00000467263 EWSR1Q01844 656 aaKnown RBP eCLIP2.53□□□□□ -2
SMC4-207ENST00000467263 MAP2K1Q02750 393 aaPredicted RBP2.53□□□□□ -2
SMC4-207ENST00000467263 CHRNB3Q05901 458 aa2.53□□□□□ -2
SMC4-207ENST00000467263 ATL3Q6DD88 541 aa2.53□□□□□ -2
SMC4-207ENST00000467263 C16orf62Q7Z3J2 963 aa2.53□□□□□ -2
SMC4-207ENST00000467263 ZNF619Q8N2I2 560 aa2.53□□□□□ -2
SMC4-207ENST00000467263 ARL10Q8N8L6 244 aa2.53□□□□□ -2
SMC4-207ENST00000467263 PNPT1Q8TCS8 783 aaKnown RBP2.53□□□□□ -2
SMC4-207ENST00000467263 KCNK16Q96T55 309 aa2.53□□□□□ -2
SMC4-207ENST00000467263 SLC6A7Q99884 636 aa2.53□□□□□ -2
SMC4-207ENST00000467263 KRT23Q9C075 422 aa2.53□□□□□ -2
SMC4-207ENST00000467263 CYTL1Q9NRR1 136 aa2.53□□□□□ -2
SMC4-207ENST00000467263 AIG1Q9NVV5 245 aa2.53□□□□□ -2
SMC4-207ENST00000467263 MTRF1LQ9UGC7 380 aaKnown RBP2.53□□□□□ -2
SMC4-207ENST00000467263 HELTA6NFD8 242 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 VSTM2BA6NLU5 285 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 GFYI3L273 518 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 ECI2O75521 394 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 CSF2P04141 144 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 ARF4P18085 180 aaPredicted RBP2.52□□□□□ -2.01
SMC4-207ENST00000467263 CYP2B6P20813 491 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 PRDX3P30048 256 aaKnown RBP2.52□□□□□ -2.01
SMC4-207ENST00000467263 LHX2P50458 406 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 PARP10Q53GL7 1025 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 TOR1AIP1Q5JTV8 583 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 C1orf146Q5VVC0 180 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 LRRC8BQ6P9F7 803 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 ARSKQ6UWY0 536 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 ZNF429Q86V71 674 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 OR5L2Q8NGL0 311 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 CHCHD10Q8WYQ3 142 aaPredicted RBP2.52□□□□□ -2.01
SMC4-207ENST00000467263 PIGCQ92535 297 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 FICDQ9BVA6 458 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 SPATA16Q9BXB7 569 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 ZNF385DQ9H6B1 395 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 SLC25A22Q9H936 323 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 CALHM2Q9HA72 323 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 CHMP2BQ9UQN3 213 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 NEUROG3Q9Y4Z2 214 aa2.52□□□□□ -2.01
SMC4-207ENST00000467263 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 TMX2-CTNND1H3BSU7 103 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 CHADO15335 359 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 PRKYO43930 277 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 FAM189A1O60320 539 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 OR10H3O60404 316 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 SCGB2A1O75556 95 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 UGT2B17O75795 530 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 PCCAP05165 728 aaPredicted RBP2.51□□□□□ -2.01
SMC4-207ENST00000467263 RBMY1CP0DJD4 496 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 IL10P22301 178 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 CYP2F1P24903 491 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 PRKXP51817 358 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 RABGAP1LQ5R372 815 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 C12orf60Q5U649 245 aa2.51□□□□□ -2.01
SMC4-207ENST00000467263 CCDC137Q6PK04 289 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms