RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CEP290O15078 2479 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 C5orf58C9J3I9 102 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MID1O15344 667 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 HSD17B2P37059 387 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 PRKAG1P54619 331 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 CDK3Q00526 305 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 UBXN2BQ14CS0 331 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 SEC23BQ15437 767 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF630Q2M218 657 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 GSG1LQ6UXU4 331 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 C6orf120Q7Z4R8 191 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MEX3DQ86XN8 651 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 GPR32P1Q8NGA4 272 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 OR4D11Q8NGI4 311 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MRPL48Q96GC5 212 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 PPP1R16AQ96I34 528 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF514Q96K75 400 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 C20orf85Q9H1P6 137 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC25A32Q9H2D1 315 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 SLC6A20Q9NP91 592 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 NPDC1Q9NQX5 325 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MYEF2Q9P2K5 600 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MRTO4Q9UKD2 239 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 KCNK6Q9Y257 313 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 OR52A4PA6NMU1 304 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 SULT1C2O00338 296 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 IFNW1P05000 195 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 RB1P06400 928 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 SEC61A1P61619 476 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 HTR4Q13639 388 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 REEP3Q6NUK4 255 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 PGAP1Q75T13 922 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 DCUN1D3Q8IWE4 304 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 GLYATL2Q8WU03 294 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ZNF582Q96NG8 517 aaPredicted RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ASB16Q96NS5 453 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 POLR2J3Q9H1A7 115 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 KCNK12Q9HB15 430 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 MRPS18AQ9NVS2 196 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ASB6Q9NWX5 421 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 ANGPT4Q9Y264 503 aa16.78■□□□□ 0.28
SNAPC3-205ENST00000467062 CKAP5Q14008 2032 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 TRPM6Q9BX84 2022 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 RAB19A4D1S5 217 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 RFXAPO00287 272 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 HTR3BO95264 441 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 ACP2P11117 423 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 UQCRC2P22695 453 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 SNTB2Q13425 540 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 SYPL1Q16563 259 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 LCTLQ6UWM7 567 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 COMTD1Q86VU5 262 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 BMPERQ8N8U9 685 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 FAM71CQ8NEG0 241 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 OR5K2Q8NHB8 316 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 SETD7Q8WTS6 366 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 XAGE5Q8WWM1 108 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 LRR1Q96L50 414 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 DMRTA2Q96SC8 542 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 IFT27Q9BW83 186 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 OR51M1Q9H341 326 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 DDX31Q9H8H2 851 aaKnown RBP16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 PIPOXQ9P0Z9 390 aa16.77■□□□□ 0.28
SNAPC3-205ENST00000467062 MTCL1Q9Y4B5 1905 aaKnown RBP16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 C2orf92A0A1B0GVN3 265 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 A0A1W2PS29 197 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 WRBO00258 174 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 VEGFDO43915 354 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 GALR3O60755 368 aaPredicted RBP16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 ITGA10O75578 1167 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 DRD3P35462 400 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 MTNR1BP49286 362 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 TAS2R38P59533 333 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 STX4Q12846 297 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 PIP5KL1Q5T9C9 394 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 LRRTM4Q86VH4 590 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 MS4A8Q9BY19 250 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 ARL6Q9H0F7 186 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 KLHL31Q9H511 634 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 NIT2Q9NQR4 276 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 TAS2R3Q9NYW6 316 aa16.77■□□□□ 0.27
SNAPC3-205ENST00000467062 A0A1W2PPV9 198 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 PRAMEF27A3QJZ7 478 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 HMSDA8MTL9 139 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 SIGLEC5O15389 551 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 CHST10O43529 356 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 FZD7O75084 574 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 AQP8O94778 261 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 ATG12O94817 140 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 NFATC1O95644 943 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 CD3GP09693 182 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 OR12D1P0DN82 309 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 GALP22466 123 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 GPR143P51810 404 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 PITPNAQ00169 270 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 SIGLEC14Q08ET2 396 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 B3GLCTQ6Y288 498 aa16.76■□□□□ 0.27
SNAPC3-205ENST00000467062 UBE3DQ7Z6J8 389 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms