RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 ZPBPQ9BS86 351 aa11.15□□□□□ -0.62
LAMP3-202ENST00000466939 OR52D1Q9H346 318 aa11.15□□□□□ -0.62
LAMP3-202ENST00000466939 CNOT2Q9NZN8 540 aaKnown RBP11.15□□□□□ -0.62
LAMP3-202ENST00000466939 NCDNQ9UBB6 729 aa11.15□□□□□ -0.62
LAMP3-202ENST00000466939 RPL36Q9Y3U8 105 aaKnown RBP11.15□□□□□ -0.62
LAMP3-202ENST00000466939 NPFFR2Q9Y5X5 522 aa11.15□□□□□ -0.62
LAMP3-202ENST00000466939 ASCC3Q8N3C0 2202 aaKnown RBP11.15□□□□□ -0.63
LAMP3-202ENST00000466939 SEC16AO15027 2179 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 OR6C70A6NIJ9 312 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 PRR33A8MZF0 331 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 ALG1L2C9J202 215 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 GMFGO60234 142 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 MAN1A2O60476 641 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 SEC14L2O76054 403 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 INMTO95050 263 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 RCBTB2O95199 551 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 CH25HO95992 272 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 MT-CO3P00414 261 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 HMGN1P05114 100 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 STSP08842 583 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 PNMTP11086 282 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 BMP7P18075 431 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 FUT1P19526 365 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 ITPKBP27987 946 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 PSMB9P28065 219 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 GSTT1P30711 240 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 EVI2BP34910 448 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 PCOLCEQ15113 449 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 BTBD16Q32M84 506 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 CBLN3Q6UW01 205 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 C6orf15Q6UXA7 325 aaPredicted RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 B3GNT6Q6ZMB0 384 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 FAM26EQ8N5C1 309 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 TMEM163Q8TC26 289 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 FCGR1BQ92637 280 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 LIN37Q96GY3 246 aaPredicted RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 LRR1Q96L50 414 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 DEPDC7Q96QD5 511 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 TAAR9Q96RI9 348 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 CCNL2Q96S94 520 aaPredicted RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 ZNF426Q9BUY5 554 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 DEFB126Q9BYW3 111 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 MEPEQ9NQ76 525 aaPredicted RBP11.14□□□□□ -0.63
LAMP3-202ENST00000466939 IL20Q9NYY1 176 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 IL20RAQ9UHF4 553 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 COL6A3P12111 3177 aa11.14□□□□□ -0.63
LAMP3-202ENST00000466939 A0A087WUJ7 227 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 LOC102723996A0A087X1L8 192 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 SNTNA6NMZ2 147 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 NUDT14O95848 222 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 UMODP07911 640 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 PIPP12273 146 aaPredicted RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 DCKP27707 260 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 GRK5P34947 590 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 FBXW4P57775 412 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 ZNF91Q05481 1191 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 ST3GAL4Q11206 333 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 CDCP2Q5VXM1 449 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 GTF2IRD2BQ6EKJ0 949 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 LINC00114Q6XXX2 140 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 BCDIN3DQ7Z5W3 292 aaKnown RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 GTF2IRD2Q86UP8 949 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 OR2Y1Q8NGV0 311 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 C9orf43Q8TAL5 461 aaPredicted RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 SLC22A8Q8TCC7 542 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 TMCO6Q96DC7 493 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 ZNF582Q96NG8 517 aaPredicted RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 SIGLEC11Q96RL6 698 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 DDA1Q9BW61 102 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 IFT27Q9BW83 186 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 UBQLN3Q9H347 655 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 ACOT13Q9NPJ3 140 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 PTTG2Q9NZH5 202 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 METRNQ9UJH8 293 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 COMMD3-BMI1R4GMX3 469 aa11.13□□□□□ -0.63
LAMP3-202ENST00000466939 COL27A1Q8IZC6 1860 aaPredicted RBP11.13□□□□□ -0.63
LAMP3-202ENST00000466939 TRAV27A0A087WT01 109 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 CCDC187A0A096LP49 1063 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 PMS2P1A4D2B8 440 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
LAMP3-202ENST00000466939 SURF4O15260 269 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 FADS1O60427 444 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 NADKO95544 446 aaPredicted RBP11.12□□□□□ -0.63
LAMP3-202ENST00000466939 IGHEP01854 428 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 CD63P08962 238 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 PGCP20142 388 aa11.12□□□□□ -0.63
LAMP3-202ENST00000466939 C21orf33P30042 268 aaPredicted RBP11.12□□□□□ -0.63
LAMP3-202ENST00000466939 TMED10P49755 219 aaKnown RBP11.12□□□□□ -0.63
LAMP3-202ENST00000466939 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
LAMP3-202ENST00000466939 TBCEQ15813 527 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms