RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CNOT9Q92600 299 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 TRIB1Q96RU8 372 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ELAC2Q9BQ52 826 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 RSPO3Q9BXY4 272 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CHST11Q9NPF2 352 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 JKAMPQ9P055 326 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF443Q9Y2A4 671 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CAPN7Q9Y6W3 813 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 A0A0J9YW62 118 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 NUDT14O95848 222 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 TGM6O95932 706 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 CRHP06850 196 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 PABPC4LP0CB38 370 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 IL7RP16871 459 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 CTSSP25774 331 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 GRNP28799 593 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 SHC1P29353 583 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 ACAA2P42765 397 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 GYS2P54840 703 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 RPS3AP61247 264 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 GNGT1P63211 74 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 SF3A3Q12874 501 aaKnown RBP eCLIP8.51□□□□□ -1.051e-6■■□□□ 12
SDCCAG3-208ENST00000466579 CYLC2Q14093 348 aaPredicted RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 LARS2Q15031 903 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 REP15Q6BDI9 236 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 NANOGP8Q6NSW7 305 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 DHRS4L2Q6PKH6 230 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 PLEKHM3Q6ZWE6 761 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 PIGWQ7Z7B1 504 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 HMGN2P46Q86SG4 172 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 SNX32Q86XE0 403 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 CALHM3Q86XJ0 350 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 VRK2Q86Y07 508 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 LILRA2Q8N149 483 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMCO5AQ8N6Q1 288 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 RELL2Q8NC24 303 aaPredicted RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR10Q1Q8NGQ4 319 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR2V1Q8NHB1 315 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 NFKBIDQ8NI38 313 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 RP9Q8TA86 221 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 LRRC58Q96CX6 371 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 KLHL15Q96M94 604 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 SFXN3Q9BWM7 321 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 ADAM19Q9H013 955 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 ENKD1Q9H0I2 346 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 NANOGQ9H9S0 305 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 RNF122Q9H9V4 155 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 ARMCX1Q9P291 453 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 CELSR2Q9HCU4 2923 aa8.51□□□□□ -1.05
SDCCAG3-208ENST00000466579 CFAP73A6NFT4 308 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC22A20A6NK97 555 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 GJE1A6NN92 205 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 C5orf58C9J3I9 102 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 PRSS44E7EML9 344 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 C19orf84I3L1E1 186 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 AP3D1O14617 1153 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 DVL2O14641 736 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 MRASO14807 208 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SEC14L5O43304 696 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 GCM2O75603 506 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 CYP7B1O75881 506 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 TNFSF13O75888 250 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMIGD3P0DMS9 266 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 FCGR2AP12318 317 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ME2P23368 584 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC6A2P23975 617 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 FKBP2P26885 142 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 OPRM1P35372 400 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 APOBEC1P41238 236 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 HTR3AP46098 478 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 PCYT1AP49585 367 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 CLK1P49759 484 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 CCR4P51679 360 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 MAP2K6P52564 334 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 MTPNP58546 118 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SCARB2Q14108 478 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 CAPRIN1Q14444 709 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF311Q5JNZ3 666 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR2A2Q6IF42 318 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 C3orf33Q6P1S2 294 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 C8orf82Q6P1X6 216 aaPredicted RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 HACD2Q6Y1H2 254 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF550Q7Z398 422 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 MTDHQ86UE4 582 aaKnown RBP8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC30A8Q8IWU4 369 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZZZ3Q8IYH5 903 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 UBQLNLQ8IYU4 475 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 CLIP4Q8N3C7 705 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 PCYOX1LQ8NBM8 494 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 C11orf65Q8NCR3 313 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
SDCCAG3-208ENST00000466579 BHLHE22Q8NFJ8 381 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms