RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 AP3D1O14617 1153 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 AIM2O14862 343 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 TIMP3P35625 211 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 ACAA2P42765 397 aaKnown RBP18.3■□□□□ 0.52
SKA3-205ENST00000465471 SESN3P58005 492 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 VMACQ2NL98 169 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 ZNF311Q5JNZ3 666 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 GKAP1Q5VSY0 366 aaPredicted RBP18.3■□□□□ 0.52
SKA3-205ENST00000465471 DHRS4L2Q6PKH6 230 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 XKRXQ6PP77 449 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 ARPINQ7Z6K5 226 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 KRT73Q86Y46 540 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 SLC30A8Q8IWU4 369 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 MEIOBQ8N635 442 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 TMEM234Q8WY98 164 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 RND1Q92730 232 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 REXO5Q96IC2 774 aaKnown RBP18.3■□□□□ 0.52
SKA3-205ENST00000465471 DOCK7Q96N67 2140 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 ZNF583Q96ND8 569 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 LRRC37BQ96QE4 947 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 SPATA5L1Q9BVQ7 753 aa18.3■□□□□ 0.52
SKA3-205ENST00000465471 ICE1Q9Y2F5 2266 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 ASH1LQ9NR48 2969 aaKnown RBP18.29■□□□□ 0.52
SKA3-205ENST00000465471 UTP20O75691 2785 aaKnown RBP18.29■□□□□ 0.52
SKA3-205ENST00000465471 CFAP73A6NFT4 308 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 ADAMDEC1O15204 470 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 CEACAM8P31997 349 aaPredicted RBP18.29■□□□□ 0.52
SKA3-205ENST00000465471 EEFSECP57772 596 aaKnown RBP18.29■□□□□ 0.52
SKA3-205ENST00000465471 SELENBP1Q13228 472 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 CDSNQ15517 529 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 PLEKHM3Q6ZWE6 761 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 COMTD1Q86VU5 262 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 UBQLNLQ8IYU4 475 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 TRIB1Q96RU8 372 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 ZNF607Q96SK3 696 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 ECSITQ9BQ95 431 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 CACYBPQ9HB71 228 aaKnown RBP18.29■□□□□ 0.52
SKA3-205ENST00000465471 CMTM6Q9NX76 183 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 STOML1Q9UBI4 398 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 RNF6Q9Y252 685 aa18.29■□□□□ 0.52
SKA3-205ENST00000465471 A0A0G2JNJ9 132 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 FAM220BPB1ANY3 271 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 SEC14L5O43304 696 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 MFN2O95140 757 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 SHC1P29353 583 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 AQP1P29972 269 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 RYKP34925 604 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 NUDT2P50583 147 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 ESPNLQ6ZVH7 1005 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 CCDC80Q76M96 950 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 GRINAQ7Z429 371 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 SLC15A3Q8IY34 581 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 SMPDL3BQ92485 455 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 HOPXQ9BPY8 73 aaPredicted RBP18.28■□□□□ 0.52
SKA3-205ENST00000465471 ARMC7Q9H6L4 198 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 Q9UFV3 132 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 AP3M1Q9Y2T2 418 aa18.28■□□□□ 0.52
SKA3-205ENST00000465471 A0A0J9YW62 118 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 PRORSD1PA6NEY8 169 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 TPST1O60507 370 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 SERPINB7O75635 380 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 CLDN1O95832 211 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 GKN3PP0CG01 181 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 PRG2P13727 222 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ME2P23368 584 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 APOBEC1P41238 236 aaKnown RBP18.27■□□□□ 0.52
SKA3-205ENST00000465471 IDH2P48735 452 aaKnown RBP18.27■□□□□ 0.52
SKA3-205ENST00000465471 CRYBA2P53672 197 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 DMTNQ08495 405 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 VEZF1Q14119 521 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ERICH5Q6P6B1 374 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ZNF550Q7Z398 422 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 LILRA2Q8N149 483 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 C9orf106Q8NAJ2 232 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 CCDC197Q8NCU1 140 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 NAXEQ8NCW5 288 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 BHLHE22Q8NFJ8 381 aaPredicted RBP18.27■□□□□ 0.52
SKA3-205ENST00000465471 TNIP2Q8NFZ5 429 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ZNF563Q8TA94 476 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ASB5Q8WWX0 329 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 WNT2BQ93097 391 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 KLHL15Q96M94 604 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 PIF1Q9H611 641 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 TMEM185BQ9H7F4 350 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ARL8BQ9NVJ2 186 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ABCD2Q9UBJ2 740 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 USP22Q9UPT9 525 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 ZNF175Q9Y473 711 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 CACNA1CQ13936 2221 aa18.27■□□□□ 0.52
SKA3-205ENST00000465471 MED12LQ86YW9 2145 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 HECTD1Q9ULT8 2610 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 CCT8L1PA6NM43 557 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 NME4O00746 187 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 EIF1AYO14602 144 aaKnown RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 GP1BBP13224 206 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 UQCRBP14927 111 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 CHRNB4P30926 498 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 SLC1A3P43003 542 aa18.26■□□□□ 0.51
SKA3-205ENST00000465471 RPS3AP61247 264 aaKnown RBP18.26■□□□□ 0.51
SKA3-205ENST00000465471 MERTKQ12866 999 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms