RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ANKZF1Q9H8Y5 726 aa15.24■□□□□ 0.03
HMGN1-210ENST00000464078 GPATCH2Q9NW75 528 aa15.24■□□□□ 0.03
HMGN1-210ENST00000464078 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
HMGN1-210ENST00000464078 NPIPA5A0A0B4J1W7 369 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 NPIPA7E9PJI5 369 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 GTPBP1O00178 669 aaKnown RBP15.23■□□□□ 0.03
HMGN1-210ENST00000464078 AZIN1O14977 448 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 SCAMP2O15127 329 aaKnown RBP15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF264O43296 627 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 CSF3P09919 207 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 DHRS4L1P0CG22 281 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 NPIPA8P0DM63 369 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 UBL4AP11441 157 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 EFNA1P20827 205 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-210ENST00000464078 PTNP21246 168 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 HPCAL1P37235 193 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 CBFBQ13951 182 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 PDK3Q15120 406 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 NDUFAF6Q330K2 333 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 FBXW9Q5XUX1 488 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 KLHL17Q6TDP4 642 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 HOMEZQ8IX15 550 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF100Q8IYN0 542 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 MUC15Q8N387 334 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF525Q8N782 197 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ST8SIA1Q92185 356 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 ARL8AQ96BM9 186 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 CHMP6Q96FZ7 201 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 KCNK17Q96T54 332 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 TRMOQ9BU70 441 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 AMBRA1Q9C0C7 1298 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 TUBB1Q9H4B7 451 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 SLC25A15Q9Y619 301 aa15.23■□□□□ 0.03
HMGN1-210ENST00000464078 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.032e-11■■■■■ 38.2
HMGN1-210ENST00000464078 SVEP1Q4LDE5 3571 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 CHEK2O96017 543 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 BCKDHAP12694 445 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 CD40P25942 277 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 RPL3P39023 403 aaKnown RBP15.22■□□□□ 0.03
HMGN1-210ENST00000464078 CCT3P49368 545 aaKnown RBP15.22■□□□□ 0.03
HMGN1-210ENST00000464078 DIO1P49895 249 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 RNF144AP50876 292 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-210ENST00000464078 SKP2Q13309 424 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 TP53BP2Q13625 1128 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 RAB35Q15286 201 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 LIPMQ5VYY2 423 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 KANK2Q63ZY3 851 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 SLC22A25Q6T423 547 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 B3GLCTQ6Y288 498 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 FBXL14Q8N1E6 418 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 TMCO5AQ8N6Q1 288 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 MNS1Q8NEH6 495 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 SFXN5Q8TD22 340 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 C10orf105Q8TEF2 133 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 SLC25A43Q8WUT9 341 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-210ENST00000464078 FAM168AQ92567 244 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 PROX1Q92786 737 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 OR5B2Q96R09 309 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 NMUR2Q9GZQ4 415 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 SHARPINQ9H0F6 387 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 MALT1Q9UDY8 824 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 TBK1Q9UHD2 729 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 FAF1Q9UNN5 650 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-210ENST00000464078 DNAJC15Q9Y5T4 150 aa15.22■□□□□ 0.03
HMGN1-210ENST00000464078 NUP214P35658 2090 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-210ENST00000464078 A0A1W2PPM1 405 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF716A6NP11 495 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 TMEM114B3SHH9 223 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 RAD51DO75771 328 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 URI1O94763 535 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-210ENST00000464078 CPA3P15088 417 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 CRHR1P34998 444 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 CCR4P51679 360 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 CSNK2A1P68400 391 aaPredicted RBP15.21■□□□□ 0.03
HMGN1-210ENST00000464078 SPOCK1Q08629 439 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 CYB5R2Q6BCY4 276 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 ZNF614Q8N883 585 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 OR2W6PQ8NHA6 318 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 OR5P2Q8WZ92 322 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 MOAP1Q96BY2 351 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 INPP5KQ9BT40 448 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 KCNE3Q9Y6H6 103 aa15.21■□□□□ 0.03
HMGN1-210ENST00000464078 ARFGEF3Q5TH69 2177 aa15.21■□□□□ 0.02
HMGN1-210ENST00000464078 SERINC4A6NH21 518 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 C9JVG2 144 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 LINC00032P0C843 101 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 IGHV4-31P0DP07 118 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 LAMP1P11279 417 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 ZNF16P17020 682 aaPredicted RBP15.2■□□□□ 0.02
HMGN1-210ENST00000464078 CCT5P48643 541 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 EFNA4P52798 201 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 GALNTL6Q49A17 601 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 SYT14P1Q58G82 188 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 PDZK1Q5T2W1 519 aa15.2■□□□□ 0.02
HMGN1-210ENST00000464078 OR7E24Q6IFN5 339 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms