RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ZNF614Q8N883 585 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 TOR1AIP2Q8NFQ8 470 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 CDS1Q92903 461 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 FBXO17Q96EF6 278 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 MUS81Q96NY9 551 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 FUT8Q9BYC5 575 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 ADAM19Q9H013 955 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 DUSP22Q9NRW4 184 aa12.7□□□□□ -0.38
SMC1A-204ENST00000463684 ACSS1Q9NUB1 689 aaPredicted RBP12.7□□□□□ -0.38
SMC1A-204ENST00000463684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMC1A-204ENST00000463684 YLPM1P49750 1951 aaKnown RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 SULT2B1O00204 365 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 AKAP10O43572 662 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 GSTA1P08263 222 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 DIO1P49895 249 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 CCR4P51679 360 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 ATP12AP54707 1039 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 CBFBQ13951 182 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 MLC1Q15049 377 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 PDK3Q15120 406 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 QPRTQ15274 297 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 GABRA6Q16445 453 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 SWI5Q1ZZU3 235 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 BHLHB9Q6PI77 547 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 TMPPEQ6ZT21 453 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 MTDHQ86UE4 582 aaKnown RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 CCNYL1Q8N7R7 359 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 OR5W2Q8NH69 310 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 DCAKDQ8WVC6 231 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 ZNF764Q96H86 408 aaPredicted RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 METTL2AQ96IZ6 378 aaKnown RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 SORCS2Q96PQ0 1159 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 STACQ99469 402 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 VRK1Q99986 396 aaPredicted RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 KCNF1Q9H3M0 494 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 PIGUQ9H490 435 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 REEP4Q9H6H4 257 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 ANKZF1Q9H8Y5 726 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 ZDHHC18Q9NUE0 388 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 TMEFF2Q9UIK5 374 aaPredicted RBP12.69□□□□□ -0.38
SMC1A-204ENST00000463684 TRAF6Q9Y4K3 522 aa12.69□□□□□ -0.38
SMC1A-204ENST00000463684 IGKV3D-15A0A087WSY6 115 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 H3BQF6 201 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 GPR171O14626 319 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 ZNF264O43296 627 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 EIF4E2O60573 245 aaKnown RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 TBX19O60806 448 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 MRPL33O75394 65 aaKnown RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 HMGN2P05204 90 aaKnown RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 FRKP42685 505 aaPredicted RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 SNRPD2P62316 118 aaKnown RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 SLC7A5Q01650 507 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 NDUFAF6Q330K2 333 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 TIGD2Q4W5G0 525 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 CDC73Q6P1J9 531 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 RELL1Q8IUW5 271 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 GSTO2Q9H4Y5 243 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
SMC1A-204ENST00000463684 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 DTNAQ9Y4J8 743 aa12.68□□□□□ -0.38
SMC1A-204ENST00000463684 FREM1Q5H8C1 2179 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 H6PDO95479 791 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 DDX5P17844 614 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 LASP1Q14847 261 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 KIAA0040Q15053 153 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 MST1LQ2TV78 715 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 EXOSC6Q5RKV6 272 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 DCST2Q5T1A1 773 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 SLC46A3Q7Z3Q1 461 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 C17orf78Q8N4C9 275 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 WDR31Q8NA23 367 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 ADAMTS15Q8TE58 950 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 ZNF524Q96C55 264 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 ZMYND19Q96E35 227 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 FAM120BQ96EK7 910 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 BHLHE41Q9C0J9 482 aaPredicted RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 BPESC1Q9GZL8 116 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 QRSL1Q9H0R6 528 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 TSPYL1Q9H0U9 437 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
SMC1A-204ENST00000463684 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 C1orf109Q9NX04 203 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 UPB1Q9UBR1 384 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 MOKQ9UQ07 419 aa12.67□□□□□ -0.38
SMC1A-204ENST00000463684 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 ETV2O00321 342 aaPredicted RBP12.66□□□□□ -0.38
SMC1A-204ENST00000463684 SLC28A1O00337 649 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 CYP7B1O75881 506 aa12.66□□□□□ -0.38
SMC1A-204ENST00000463684 TFPIP10646 304 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms