RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ING1Q9UK53 422 aaPredicted RBP18.29■□□□□ 0.52
PDLIM4-205ENST00000463615 SLC35A3Q9Y2D2 325 aa18.29■□□□□ 0.52
PDLIM4-205ENST00000463615 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 SDHDO14521 159 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 TMCC2O75069 709 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 SNNO75324 88 aaPredicted RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 CPSF4O95639 269 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 ALDOCP09972 364 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 OR12D1P0DN82 309 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 PGCP20142 388 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 S100A3P33764 101 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 WDR4P57081 412 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 SESN3P58005 492 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 LRRC74AQ0VAA2 488 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 MAPK14Q16539 360 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 FAM174BQ3ZCQ3 159 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 FRRS1Q6ZNA5 592 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 NUFIP2Q7Z417 695 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 SPATA19Q7Z5L4 167 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 TUSC5Q8IXB3 177 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 TMCO5AQ8N6Q1 288 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 STEAP2Q8NFT2 490 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 XAGE5Q8WWM1 108 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 ROPN1LQ96C74 230 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 POM121Q96HA1 1249 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 CENPHQ9H3R5 247 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 EXOSC3Q9NQT5 275 aaKnown RBP18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 KLHL9Q9P2J3 617 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 WDR45Q9Y484 360 aa18.28■□□□□ 0.52
PDLIM4-205ENST00000463615 SMPD2O60906 423 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 H6PDO95479 791 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 PAX1P15863 534 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 ENPP1P22413 925 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 SLC7A1P30825 629 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 KHKP50053 298 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 CCR4P51679 360 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 P2RY6Q15077 328 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 HHATQ5VTY9 493 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 BIVMQ86UB2 503 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 ZNF619Q8N2I2 560 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 RFWD2Q8NHY2 731 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 SLC25A43Q8WUT9 341 aaPredicted RBP18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 C18orf12Q96KH6 178 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 TEX37Q96LM6 180 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 PSD2Q9BQI7 771 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 C12orf49Q9H741 205 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 UBTD1Q9HAC8 227 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 SERINC1Q9NRX5 453 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 THAP1Q9NVV9 213 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 GPR45Q9Y5Y3 372 aa18.27■□□□□ 0.52
PDLIM4-205ENST00000463615 PRAMEF27A3QJZ7 478 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 ZNF724A8MTY0 619 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 HMGN4O00479 90 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 HDAC3O15379 428 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 CYTIPO60759 359 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 UBTFL6P0CB48 400 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 FKBP2P26885 142 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 APOBEC1P41238 236 aaKnown RBP18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 MAGEA8P43361 318 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 SFRP5Q5T4F7 317 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 TNFAIP8L2Q6P589 184 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 PLEKHM3Q6ZWE6 761 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 OLIG3Q7RTU3 272 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 RAB3IL1Q8TBN0 382 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 PMM1Q92871 262 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 RAB8BQ92930 207 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 CCL19Q99731 98 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 SLC35A5Q9BS91 424 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 MARCOQ9UEW3 520 aaPredicted RBP18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 LIPT1Q9Y234 373 aa18.26■□□□□ 0.51
PDLIM4-205ENST00000463615 FREM1Q5H8C1 2179 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 DSCAMO60469 2012 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 NIPBLQ6KC79 2804 aaeCLIP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 A0A1W2PNR3 127 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 TMEM120BA0PK00 339 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 TRPC5OSA6NMA1 111 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 SLCO1B7G3V0H7 640 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 SMAD9O15198 467 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 PGRP06401 933 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 IL12AP29459 219 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 OR3A2P47893 321 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 UFM1P61960 85 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 PLAURQ03405 335 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 PDK3Q15120 406 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 ADAM5Q6NVV9 412 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 ZNF704Q6ZNC4 412 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 TMPPEQ6ZT21 453 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 CMIPQ8IY22 773 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 TRIML2Q8N7C3 387 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 GLB1L3Q8NCI6 653 aaPredicted RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 ATP6V1C2Q8NEY4 427 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 MAELQ96JY0 434 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 TRNT1Q96Q11 434 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 CCDC106Q9BWC9 280 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 GSX2Q9BZM3 304 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 QRSL1Q9H0R6 528 aaKnown RBP18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 PRR14LQ5THK1 2151 aa18.25■□□□□ 0.51
PDLIM4-205ENST00000463615 IGKV3D-15A0A087WSY6 115 aa18.24■□□□□ 0.51
PDLIM4-205ENST00000463615 CCDC154A6NI56 674 aa18.24■□□□□ 0.51
PDLIM4-205ENST00000463615 ZNF814B7Z6K7 855 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms