RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 TMEM27Q9HBJ8 222 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 KLHL1Q9NR64 748 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 MED17Q9NVC6 651 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TAS2R10Q9NYW0 307 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 RHCGQ9UBD6 479 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TUBD1Q9UJT1 453 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 C15orf41Q9Y2V0 281 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 LYVE1Q9Y5Y7 322 aa13.03□□□□□ -0.32
COL6A1-202ENST00000463060 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 C7orf72A4D263 438 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ADAMDEC1O15204 470 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 PRKCAP17252 672 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 RRM2P31350 389 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 IST1P53990 364 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 KCNAB2Q13303 367 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 GK3PQ14409 553 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 GANABQ14697 944 aaKnown RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 SWT1Q5T5J6 900 aaKnown RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 WDR88Q6ZMY6 472 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 PLEKHM3Q6ZWE6 761 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ATG4DQ86TL0 474 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 NKAIN4Q8IVV8 208 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 TMEM178AQ8NBL3 297 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 DNAJA4Q8WW22 397 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ST8SIA1Q92185 356 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 C5orf34Q96MH7 638 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 EPYCQ99645 322 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ADNPQ9H2P0 1102 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 C12orf10Q9HB07 376 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 BOKQ9UMX3 212 aaPredicted RBP13.02□□□□□ -0.33
COL6A1-202ENST00000463060 TESMINQ9Y4I5 508 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 USP24Q9UPU5 2620 aa13.02□□□□□ -0.33
COL6A1-202ENST00000463060 ATMQ13315 3056 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 A0A087WZY1 265 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 CHP2O43745 196 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 EFNA2O43921 213 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 GMFGO60234 142 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 GADD45GO95257 159 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 BAG2O95816 211 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 GP1BBP13224 206 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 UQCRBP14927 111 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 MASP1P48740 699 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 MEOX1P50221 254 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 CCR4P51679 360 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 SMIM11AP58511 58 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 TAS2R41P59536 307 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 COPZ1P61923 177 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 FOXK1P85037 733 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 SLC34A1Q06495 639 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 ST3GAL3Q11203 375 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 PPP1R8Q12972 351 aaKnown RBP13.01□□□□□ -0.33
COL6A1-202ENST00000463060 TRAM2Q15035 370 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-202ENST00000463060 COLEC12Q5KU26 742 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 FBXW10Q5XX13 1052 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 RPUSD3Q6P087 351 aaKnown RBP13.01□□□□□ -0.33
COL6A1-202ENST00000463060 ULK3Q6PHR2 472 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
COL6A1-202ENST00000463060 ADGRG3Q86Y34 549 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 OR4K17Q8NGC6 315 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 NRBF2Q96F24 287 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 BARD1Q99728 777 aaKnown RBP13.01□□□□□ -0.33
COL6A1-202ENST00000463060 BDH2Q9BUT1 245 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 FNDC11Q9BVV2 318 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 SEMA6AQ9H2E6 1030 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 PTGES2Q9H7Z7 377 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 OSGIN1Q9UJX0 560 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 SLC7A7Q9UM01 511 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 TP53TG5Q9Y2B4 290 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 NCKAP5O14513 1909 aa13.01□□□□□ -0.33
COL6A1-202ENST00000463060 A0A087WUJ7 227 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 A0A087WUU8 490 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 TRBV4-1A0A0J9YWV2 114 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 SH3PXD2BA1X283 911 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 TNFRSF11BO00300 401 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 CDC40O60508 579 aaKnown RBP eCLIP13□□□□□ -0.33
COL6A1-202ENST00000463060 NUDT14O95848 222 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 FAM87AP0C7U9 286 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 DPP4P27487 766 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 ADH6P28332 368 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 TACR3P29371 465 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 SRD5A2P31213 254 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 DNAJA1P31689 397 aaKnown RBP13□□□□□ -0.33
COL6A1-202ENST00000463060 GCKP35557 465 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
COL6A1-202ENST00000463060 SPIBQ01892 262 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 ZNF169Q14929 603 aaPredicted RBP13□□□□□ -0.33
COL6A1-202ENST00000463060 SEC23BQ15437 767 aa13□□□□□ -0.33
COL6A1-202ENST00000463060 ALG10BQ5I7T1 473 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms