RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	TMEM160	Q9NX00	188 aa		9.84	□□□□□ -0.83
PTPN7-204	ENST00000462815	KLHL9	Q9P2J3	617 aa		9.84	□□□□□ -0.83
PTPN7-204	ENST00000462815	GIMAP2	Q9UG22	337 aa		9.84	□□□□□ -0.83
PTPN7-204	ENST00000462815	DTNA	Q9Y4J8	743 aa		9.84	□□□□□ -0.83
PTPN7-204	ENST00000462815	PLCE1	Q9P212	2302 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815		C9JVG2	144 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	PDLIM1	O00151	329 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	SSX4	O60224	188 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	BCAS1	O75363	584 aa	Predicted RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	ERLIN1	O75477	346 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	CRCP	O75575	148 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	F12	P00748	615 aa	Predicted RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	CHRNG	P07510	517 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	CPA3	P15088	417 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	ARRB2	P32121	409 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	TTK	P33981	857 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	ASMT	P46597	345 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	FOXG1	P55316	489 aa	Predicted RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	RASGEF1B	Q0VAM2	473 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	PTGR1	Q14914	329 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	STK11	Q15831	433 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	NRF1	Q16656	503 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	KRTAP24-1	Q3LI83	254 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	CHRFAM7A	Q494W8	412 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	C10orf107	Q8IVU9	208 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	RIMKLA	Q8IXN7	391 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	FAM71C	Q8NEG0	241 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	ATP6V1C2	Q8NEY4	427 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	TMEM158	Q8WZ71	300 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	ZNF775	Q96BV0	537 aa	Predicted RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	COQ8B	Q96D53	544 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	REXO5	Q96IC2	774 aa	Known RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	HS6ST2	Q96MM7	605 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	CACNG6	Q9BXT2	260 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	IQCG	Q9H095	443 aa	Known RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	QRSL1	Q9H0R6	528 aa	Known RBP	9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815	SLC25A15	Q9Y619	301 aa		9.83	□□□□□ -0.84
PTPN7-204	ENST00000462815		H7C417	338 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	PIP5K1B	O14986	540 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	ZNF264	O43296	627 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	EIF4E2	O60573	245 aa	Known RBP	9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	NUDT14	O95848	222 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	FES	P07332	822 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	FGF4	P08620	206 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	GGT1	P19440	569 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	CCT3	P49368	545 aa	Known RBP	9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	DIO1	P49895	249 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	PDK3	Q15120	406 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	ZNF141	Q15928	474 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	GALNTL6	Q49A17	601 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TIGD2	Q4W5G0	525 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	ARL13A	Q5H913	290 aa	Predicted RBP	9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	CFAP157	Q5JU67	520 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	PDZK1	Q5T2W1	519 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	AP1AR	Q63HQ0	302 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	C3orf33	Q6P1S2	294 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	OLIG3	Q7RTU3	272 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	R3HCC1L	Q7Z5L2	792 aa	Known RBP	9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	P2RY8	Q86VZ1	359 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	ZNF525	Q8N782	197 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	ZNF527	Q8NB42	609 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TOR1AIP2	Q8NFQ8	470 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	OR56A1	Q8NGH5	318 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	OR5D16	Q8NGK9	328 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	SFXN5	Q8TD22	340 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TWIST2	Q8WVJ9	160 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	OR5P2	Q8WZ92	322 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	HTRA1	Q92743	480 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	C3orf30	Q96M34	536 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	OR7D2	Q96RA2	312 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TNFRSF13C	Q96RJ3	184 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	SDF2	Q99470	211 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TRMO	Q9BU70	441 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	AMBRA1	Q9C0C7	1298 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	NMUR2	Q9GZQ4	415 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	CBLN4	Q9NTU7	201 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	MALT1	Q9UDY8	824 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	FIS1	Q9Y3D6	152 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	TENM1	Q9UKZ4	2725 aa		9.82	□□□□□ -0.84
PTPN7-204	ENST00000462815	FAM234B	A2RU67	622 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	SERINC4	A6NH21	518 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	DYNC1I1	O14576	645 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	FCMR	O60667	390 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	UGT2B17	O75795	530 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	C6orf47	O95873	294 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	C8B	P07358	591 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	ITGA5	P08648	1049 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	IGHV4-31	P0DP07	118 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	UBL4A	P11441	157 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	ATP6V1C1	P21283	382 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	CD40	P25942	277 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	SLC7A1	P30825	629 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	HPCAL1	P37235	193 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	NUDT6	P53370	316 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	SESN3	P58005	492 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	SLC25A3	Q00325	362 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	FUT5	Q11128	374 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	TP53BP2	Q13625	1128 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	CBFB	Q13951	182 aa		9.81	□□□□□ -0.84
PTPN7-204	ENST00000462815	MAPK14	Q16539	360 aa		9.81	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms