RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 WFDC11Q8NEX6 87 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 MGARPQ8TDB4 240 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 ARL8AQ96BM9 186 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 OR10A4Q9H209 315 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 WDR55Q9H6Y2 383 aaPredicted RBP16.88■□□□□ 0.29
VARS-220ENST00000461874 MARCOQ9UEW3 520 aaPredicted RBP16.88■□□□□ 0.29
VARS-220ENST00000461874 GPR52Q9Y2T5 361 aa16.88■□□□□ 0.29
VARS-220ENST00000461874 HEATR5AQ86XA9 2040 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 A0A1W2PNR3 127 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 PRAMEF27A3QJZ7 478 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 TRPC5OSA6NMA1 111 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 KLF4O43474 513 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 C1QCP02747 245 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 FOSL1P15407 271 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 PSMB1P20618 241 aaKnown RBP16.87■□□□□ 0.29
VARS-220ENST00000461874 EPHA3P29320 983 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 IL12AP29459 219 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 PGM1P36871 562 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 ACKR1Q16570 336 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 BEX5Q5H9J7 111 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 C3orf33Q6P1S2 294 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 TFAP2EQ6VUC0 442 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 FRRS1Q6ZNA5 592 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 NUFIP2Q7Z417 695 aaKnown RBP16.87■□□□□ 0.29
VARS-220ENST00000461874 ZNF619Q8N2I2 560 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 SLC43A2Q8N370 569 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 FAM71CQ8NEG0 241 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 TMEM234Q8WY98 164 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 ZG16BQ96DA0 208 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 PIP5K1AQ99755 562 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 ACTR6Q9GZN1 396 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 QRSL1Q9H0R6 528 aaKnown RBP16.87■□□□□ 0.29
VARS-220ENST00000461874 UBTD1Q9HAC8 227 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 ACER3Q9NUN7 267 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 GPR45Q9Y5Y3 372 aa16.87■□□□□ 0.29
VARS-220ENST00000461874 ARID1AO14497 2285 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 GOLGA8QA0A0J9YX86 632 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 GOLGA8OA6NCC3 632 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 CCDC154A6NI56 674 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 C9JVG2 144 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 GOLGA8NF8WBI6 632 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 HMGN4O00479 90 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 BCAS1O75363 584 aaPredicted RBP16.86■□□□□ 0.29
VARS-220ENST00000461874 H6PDO95479 791 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 PGRP06401 933 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 YES1P07947 543 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 PGCP20142 388 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 FPR1P21462 350 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 MAGOHP61326 146 aaKnown RBP16.86■□□□□ 0.29
VARS-220ENST00000461874 RNF130Q86XS8 419 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 KRTAP1-3Q8IUG1 177 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 GABRG1Q8N1C3 465 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 RAB3IL1Q8TBN0 382 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 PIGTQ969N2 578 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 OR52E6Q96RD3 313 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 PANX1Q96RD7 426 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 TACO1Q9BSH4 297 aaKnown RBP16.86■□□□□ 0.29
VARS-220ENST00000461874 INPP5KQ9BT40 448 aa16.86■□□□□ 0.29
VARS-220ENST00000461874 ING1Q9UK53 422 aaPredicted RBP16.86■□□□□ 0.29
VARS-220ENST00000461874 PRR14LQ5THK1 2151 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 IGHV3-15A0A0B4J1V0 119 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.85■□□□□ 0.29
VARS-220ENST00000461874 SLCO1B7G3V0H7 640 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 GCM2O75603 506 aaPredicted RBP16.85■□□□□ 0.29
VARS-220ENST00000461874 KITP10721 976 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 NKX6-1P78426 367 aaPredicted RBP16.85■□□□□ 0.29
VARS-220ENST00000461874 CHRNEQ04844 493 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 LRRC74AQ0VAA2 488 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 MERTKQ12866 999 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 ATG16L1Q676U5 607 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 C20orf204Q6ZNR8 217 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 PLEKHM3Q6ZWE6 761 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 STEAP2Q8NFT2 490 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 TLCD1Q96CP7 247 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 OR5B2Q96R09 309 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 ZBTB18Q99592 522 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 HDHD5Q9BXW7 423 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 BCO1Q9HAY6 547 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 SERINC1Q9NRX5 453 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
VARS-220ENST00000461874 NKIRAS1Q9NYS0 192 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 KLHL9Q9P2J3 617 aa16.85■□□□□ 0.29
VARS-220ENST00000461874 SMPD2O60906 423 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 CDKN2CP42773 168 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 KCNJ10P78508 379 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 TXNL4AP83876 142 aaKnown RBP16.84■□□□□ 0.29
VARS-220ENST00000461874 HPCAP84074 193 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 SHEQ5VZ18 495 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 ZNF621Q6ZSS3 439 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 TMPPEQ6ZT21 453 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 HMGN2P46Q86SG4 172 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 WFDC8Q8IUA0 241 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 LRRC75A-AS1Q8N1F1 130 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 ANKFN1Q8N957 763 aa16.84■□□□□ 0.29
VARS-220ENST00000461874 GLB1L3Q8NCI6 653 aaPredicted RBP16.84■□□□□ 0.29
VARS-220ENST00000461874 SLC25A43Q8WUT9 341 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms