RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 GZMMP51124 257 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 ATP12AP54707 1039 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 SRYQ05066 204 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 FOXF2Q12947 444 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 COQ5Q5HYK3 327 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 GKAP1Q5VSY0 366 aaPredicted RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 NANOGP8Q6NSW7 305 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 YTHDF3Q7Z739 585 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 YRDCQ86U90 279 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 PTOV1Q86YD1 416 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 ANKS4BQ8N8V4 417 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 FADS6Q8N9I5 356 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 OR2M3Q8NG83 312 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 OR1J4Q8NGS1 313 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 NFKBIDQ8NI38 313 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 RP9Q8TA86 221 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 INTS12Q96CB8 462 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 PERPQ96FX8 193 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 TMEM19Q96HH6 336 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 SH3YL1Q96HL8 342 aaPredicted RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 TRNT1Q96Q11 434 aaKnown RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 NPAS1Q99742 590 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 BDH2Q9BUT1 245 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 DSN1Q9H410 356 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 PIF1Q9H611 641 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 NANOGQ9H9S0 305 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 CALHM2Q9HA72 323 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 JKAMPQ9P055 326 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 C6orf203Q9P0P8 240 aaPredicted RBP13.23□□□□□ -0.29
NCK1-202ENST00000460960 NDRG3Q9UGV2 375 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 HIVEP2P31629 2446 aa13.23□□□□□ -0.29
NCK1-202ENST00000460960 TRIM64A6NGJ6 449 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 TRIM64BA6NI03 449 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 H0Y3Z8 333 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 AGR2O95994 175 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 AK1P00568 194 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 ARAFP10398 606 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 FADDQ13158 208 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 ZNF141Q15928 474 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 GCNT6Q5T4J0 391 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 CBLN3Q6UW01 205 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 PLXDC2Q6UX71 529 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 GCNT2Q8N0V5 402 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 ZNF619Q8N2I2 560 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 ZNF614Q8N883 585 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 CCDC197Q8NCU1 140 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 BCAS4Q8TDM0 211 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 PIGTQ969N2 578 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 LRRC37BQ96QE4 947 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 CCL19Q99731 98 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 THUMPD3Q9BV44 507 aaKnown RBP13.22□□□□□ -0.29
NCK1-202ENST00000460960 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 KAT8Q9H7Z6 458 aaKnown RBP13.22□□□□□ -0.29
NCK1-202ENST00000460960 A4GALTQ9NPC4 353 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 PPP4R1LQ9P1A2 415 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 P2RX2Q9UBL9 471 aa13.22□□□□□ -0.29
NCK1-202ENST00000460960 DSPPQ9NZW4 1301 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 SHISA8B8ZZ34 492 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 SCDO00767 359 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 NDUFAB1O14561 156 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 NDUFB5O43674 189 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 SOX30O94993 753 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 RPS4Y1P22090 263 aaKnown RBP13.21□□□□□ -0.29
NCK1-202ENST00000460960 SLC6A2P23975 617 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 LCN1P31025 176 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 NUDT2P50583 147 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 ZNF117Q03924 483 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 AP1ARQ63HQ0 302 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 C8orf82Q6P1X6 216 aaPredicted RBP13.21□□□□□ -0.29
NCK1-202ENST00000460960 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 COMTD1Q86VU5 262 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 FAM83FQ8NEG4 500 aaPredicted RBP13.21□□□□□ -0.29
NCK1-202ENST00000460960 OR10A6Q8NH74 314 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 PHOSPHO1Q8TCT1 267 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 TUBA1CQ9BQE3 449 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 CMTM6Q9NX76 183 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 LIPT1Q9Y234 373 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 CARD8Q9Y2G2 431 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 CHST2Q9Y4C5 530 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 DTNAQ9Y4J8 743 aa13.21□□□□□ -0.29
NCK1-202ENST00000460960 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 A0A1W2PQD3 144 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 AGAP5A6NIR3 686 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 EVPLLA8MZ36 301 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 ZIC3O60481 467 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 ADAM11O75078 769 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 GCM2O75603 506 aaPredicted RBP13.2□□□□□ -0.3
NCK1-202ENST00000460960 DCTN3O75935 186 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
NCK1-202ENST00000460960 AQP1P29972 269 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 MAGEA8P43361 318 aa13.2□□□□□ -0.3
NCK1-202ENST00000460960 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
NCK1-202ENST00000460960 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms