RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 PSMA2P25787 234 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 NF2P35240 595 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 GNPDA1P46926 289 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 RIPPLY3P57055 190 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 RPL32P62910 135 aaKnown RBP2.46□□□□□ -2.02
RFC4-211ENST00000460408 CNTN2Q02246 1040 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 BDH1Q02338 343 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 MAPK6Q16659 721 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 RABGAP1LQ5R372 815 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 OR8G2PQ6IF36 304 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 SLC25A24Q6NUK1 477 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 ACSM5Q6NUN0 579 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 SCYL2Q6P3W7 929 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 CXCL17Q6UXB2 119 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 TMEM17Q86X19 198 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 ZNF677Q86XU0 584 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 ABCA7Q8IZY2 2146 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 C11orf42Q8N5U0 333 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 PSMG2Q969U7 264 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 RAB7BQ96AH8 199 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 FAF2Q96CS3 445 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 SDSLQ96GA7 329 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 DUSP16Q9BY84 665 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 ZNF702PQ9H963 129 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 WRAP73Q9P2S5 460 aaPredicted RBP2.46□□□□□ -2.02
RFC4-211ENST00000460408 APOBEC3BQ9UH17 382 aaKnown RBP2.46□□□□□ -2.02
RFC4-211ENST00000460408 RIMS3Q9UJD0 308 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 BLOC1S6Q9UL45 172 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 A0A0C4DFX4 3053 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 TOPAZ1Q8N9V7 1692 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 THSD7AQ9UPZ6 1657 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 AGRNO00468 2067 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 CNTNAP1P78357 1384 aa2.46□□□□□ -2.02
RFC4-211ENST00000460408 CFAP65Q6ZU64 1925 aaKnown RBP2.46□□□□□ -2.02
RFC4-211ENST00000460408 CCDC18Q5T9S5 1454 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 CACNA1GO43497 2377 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 CCDC144AA2RUR9 1427 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 LOC100131303A0A0U1RQF7 123 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 OR6C65A6NJZ3 312 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 PP2D1A8MPX8 630 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 NDC80O14777 642 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 OR1F1O43749 312 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 GPX5O75715 221 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 IDH1O75874 414 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 TM7SF2O76062 418 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 IGKV3-15P01624 115 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 STSP08842 583 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 PGCP20142 388 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 SOX6P35712 828 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 IGLV3-21P80748 117 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 EWSR1Q01844 656 aaKnown RBP eCLIP2.45□□□□□ -2.02
RFC4-211ENST00000460408 CSTF1Q05048 431 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 RIPPLY1Q0D2K3 151 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 SNTB2Q13425 540 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 LAGE3Q14657 143 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 KIAA0040Q15053 153 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 SLC5A12Q1EHB4 618 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 CCDC57Q2TAC2 916 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 RNF212Q495C1 297 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 USH1GQ495M9 461 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 SLC36A3Q495N2 470 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 PYHIN1Q6K0P9 492 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 FAHD2BQ6P2I3 314 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 CES3Q6UWW8 571 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 C17orf82Q86X59 251 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 APOBEC3FQ8IUX4 373 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 ZDHHC21Q8IVQ6 265 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 FBXO16Q8IX29 292 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 UBQLNLQ8IYU4 475 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 C15orf54Q8N8G6 183 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 RAET1EQ8TD07 263 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 SPRYD4Q8WW59 207 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 IL1F10Q8WWZ1 152 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 FAM3CQ92520 227 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 FAHD2AQ96GK7 314 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 NOL4LQ96MY1 436 aaPredicted RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 MCHR1Q99705 422 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 TPPP3Q9BW30 176 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 RAB33BQ9H082 229 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 RIBC2Q9H4K1 309 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 CAB39LQ9H9S4 337 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 TMOD2Q9NZR1 351 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 TMEM9Q9P0T7 183 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 CGNQ9P2M7 1197 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 XPO7Q9UIA9 1087 aaKnown RBP2.45□□□□□ -2.02
RFC4-211ENST00000460408 FLVCR1Q9Y5Y0 555 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 KIF25-AS1Q9Y6Z4 181 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 ARHGEF10O15013 1369 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 ANKRD30BQ9BXX2 1392 aa2.45□□□□□ -2.02
RFC4-211ENST00000460408 ADAMTS9Q9P2N4 1935 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 ARHGAP31Q2M1Z3 1444 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 RIMS2Q9UQ26 1411 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 GSAPA4D1B5 854 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 ZNF705EA8MWA4 302 aaPredicted RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 XPO1O14980 1071 aaKnown RBP2.44□□□□□ -2.02
RFC4-211ENST00000460408 TBX19O60806 448 aa2.44□□□□□ -2.02
RFC4-211ENST00000460408 ZNF254O75437 659 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms