RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 VAPAQ9P0L0 249 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 FOXD3Q9UJU5 478 aaPredicted RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 MCTS1Q9ULC4 181 aaKnown RBP18.62■□□□□ 0.57
VARS-218ENST00000459667 NDUFAF1Q9Y375 327 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 DSPPQ9NZW4 1301 aa18.62■□□□□ 0.57
VARS-218ENST00000459667 MAST4O15021 2626 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 TNFSF13O75888 250 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 AQP8O94778 261 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 SYNGR4O95473 234 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 NID1P14543 1247 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 RYKP34925 604 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 SESN3P58005 492 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 RPS26P11Q5JNZ5 115 aaPredicted RBP18.61■□□□□ 0.57
VARS-218ENST00000459667 CNEP1R1Q8N9A8 125 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 PIGMQ9H3S5 423 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 ACER3Q9NUN7 267 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 DNAJB12Q9NXW2 375 aaKnown RBP18.61■□□□□ 0.57
VARS-218ENST00000459667 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.61■□□□□ 0.57
VARS-218ENST00000459667 PACSIN3Q9UKS6 424 aa18.61■□□□□ 0.57
VARS-218ENST00000459667 TRBV5-3A0A0A0MS03 114 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 BMP2P12643 396 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 SLC6A8P48029 635 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 SIRPAP78324 504 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 MERTKQ12866 999 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 MAPRE2Q15555 327 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 TMEM176BQ3YBM2 270 aaPredicted RBP18.6■□□□□ 0.57
VARS-218ENST00000459667 LIN52Q52LA3 116 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 MRPL2Q5T653 305 aaKnown RBP18.6■□□□□ 0.57
VARS-218ENST00000459667 C3orf33Q6P1S2 294 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 LUZP2Q86TE4 346 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 OR52P1PQ8NH57 321 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 OSTF1Q92882 214 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 SLC24A3Q9HC58 644 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 A4GALTQ9NPC4 353 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 CORO2BQ9UQ03 480 aa18.6■□□□□ 0.57
VARS-218ENST00000459667 A0A0G2JPF8 293 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 HNRNPCL2B2RXH8 293 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 HNRNPCL3B7ZW38 293 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 HNRNPCL1O60812 293 aaKnown RBP18.59■□□□□ 0.57
VARS-218ENST00000459667 ADAM11O75078 769 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 HNRNPCL4P0DMR1 293 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 ADSLP30566 484 aaPredicted RBP18.59■□□□□ 0.57
VARS-218ENST00000459667 SLC7A1P30825 629 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 SSTR2P30874 369 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 PEX19P40855 299 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 CPA2P48052 419 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 CARD18P57730 90 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 SNTB1Q13884 538 aaKnown RBP18.59■□□□□ 0.57
VARS-218ENST00000459667 GCNT6Q5T4J0 391 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 VWA1Q6PCB0 445 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 ZNF836Q6ZNA1 936 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 PLEKHM3Q6ZWE6 761 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 DHDDSQ86SQ9 333 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 VRK2Q86Y07 508 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 C10orf82Q8WW14 230 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 MAL2Q969L2 176 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 C14orf79Q96F83 325 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 RBM24Q9BX46 236 aaKnown RBP18.59■□□□□ 0.57
VARS-218ENST00000459667 COQ10BQ9H8M1 238 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 CACYBPQ9HB71 228 aaKnown RBP18.59■□□□□ 0.57
VARS-218ENST00000459667 SERINC1Q9NRX5 453 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 GMEB1Q9Y692 573 aa18.59■□□□□ 0.57
VARS-218ENST00000459667 ITPR2Q14571 2701 aa18.58■□□□□ 0.57
VARS-218ENST00000459667 NOTCH2Q04721 2471 aa18.58■□□□□ 0.57
VARS-218ENST00000459667 EVPLLA8MZ36 301 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 C5orf58C9J3I9 102 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 SMNDC1O75940 238 aaKnown RBP eCLIP18.58■□□□□ 0.56
VARS-218ENST00000459667 LSP1P33241 339 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 KIR2DL2P43627 348 aaPredicted RBP18.58■□□□□ 0.56
VARS-218ENST00000459667 MYBPHQ13203 477 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 ZNF239Q16600 458 aaKnown RBP18.58■□□□□ 0.56
VARS-218ENST00000459667 PRAMEF8Q5VWM4 474 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 PRAMEF7Q5VXH5 474 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 DLEU7Q6UYE1 221 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 RETREG3Q86VR2 466 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 DPP10Q8N608 796 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 BBS10Q8TAM1 723 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 CPNE4Q96A23 557 aaPredicted RBP18.58■□□□□ 0.56
VARS-218ENST00000459667 STARD4Q96DR4 205 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 SRXN1Q9BYN0 137 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 IKZF5Q9H5V7 419 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 TIGARQ9NQ88 270 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 SAR1AQ9NR31 198 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 KCNN3Q9UGI6 736 aa18.58■□□□□ 0.56
VARS-218ENST00000459667 ZNF443Q9Y2A4 671 aaPredicted RBP18.58■□□□□ 0.56
VARS-218ENST00000459667 CDHR4A6H8M9 788 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 CFAP73A6NFT4 308 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 AP3D1O14617 1153 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 PLGP00747 810 aaPredicted RBP18.57■□□□□ 0.56
VARS-218ENST00000459667 ARAFP10398 606 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 APOBEC1P41238 236 aaKnown RBP18.57■□□□□ 0.56
VARS-218ENST00000459667 IDH2P48735 452 aaKnown RBP18.57■□□□□ 0.56
VARS-218ENST00000459667 GNGT1P63211 74 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 TLE4Q04727 773 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 KLF10Q13118 480 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 LARS2Q15031 903 aaKnown RBP18.57■□□□□ 0.56
VARS-218ENST00000459667 GUSBP1Q15486 140 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 RNF220Q5VTB9 566 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 GRINAQ7Z429 371 aa18.57■□□□□ 0.56
VARS-218ENST00000459667 SPATA21Q7Z572 469 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms