RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ACVR1BP36896 505 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 CDKN1AP38936 164 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 CSNK2A1P68400 391 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 PTGR1Q14914 329 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 C6orf136Q5SQH8 315 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 DNM1P46Q6ZS02 220 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 GALNT5Q7Z7M9 940 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 KBTBD8Q8NFY9 601 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 RFWD2Q8NHY2 731 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 EPS8L3Q8TE67 593 aaKnown RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 SLC25A43Q8WUT9 341 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 APOPT1Q96IL0 206 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 OR7D2Q96RA2 312 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 TRAF4Q9BUZ4 470 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 ANKZF1Q9H8Y5 726 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 EMC3Q9P0I2 261 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 ING1Q9UK53 422 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-220ENST00000458038 KCNE3Q9Y6H6 103 aa19.06■□□□□ 0.64
CPNE1-220ENST00000458038 IGHV3-15A0A0B4J1V0 119 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 GOLGA8QA0A0J9YX86 632 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 A0A1W2PNR3 127 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 GOLGA8OA6NCC3 632 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 SERINC4A6NH21 518 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 ESPNB1AK53 854 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 GOLGA8NF8WBI6 632 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 CD5LO43866 347 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 LYZL6O75951 148 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 PGM3O95394 542 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 IGHV4-39P01824 125 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 GGT1P19440 569 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 FKBP2P26885 142 aaKnown RBP19.05■□□□□ 0.64
CPNE1-220ENST00000458038 CCR4P51679 360 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 FAPQ12884 760 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 MAD2L1Q13257 205 aaPredicted RBP19.05■□□□□ 0.64
CPNE1-220ENST00000458038 PDK3Q15120 406 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 STK11Q15831 433 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 ZNF141Q15928 474 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 TIGD2Q4W5G0 525 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 AGAP6Q5VW22 663 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 IL23RQ5VWK5 629 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 PODNL1Q6PEZ8 512 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 RIMKLAQ8IXN7 391 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 ZNF100Q8IYN0 542 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 FNDC5Q8NAU1 212 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 NEUROG1Q92886 237 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 OR5B2Q96R09 309 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 MGAT4BQ9UQ53 548 aa19.05■□□□□ 0.64
CPNE1-220ENST00000458038 SMAD9O15198 467 aaKnown RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 STX11O75558 287 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 SLU7O95391 586 aaKnown RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 CD8AP01732 235 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 PGCP20142 388 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 COX5AP20674 150 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 C21orf58P58505 322 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 SKP2Q13309 424 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 NDUFAF6Q330K2 333 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 PDZK1Q5T2W1 519 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 TMPPEQ6ZT21 453 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 HIPK1Q86Z02 1210 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 GSPT2Q8IYD1 628 aaKnown RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 RIBC1Q8N443 379 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 MAPK1IP1LQ8NDC0 245 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 ZNF75CPQ92670 426 aaPredicted RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 RHNO1Q9BSD3 238 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 THUMPD3Q9BV44 507 aaKnown RBP19.04■□□□□ 0.64
CPNE1-220ENST00000458038 DUSP26Q9BV47 211 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 PRSS50Q9UI38 385 aa19.04■□□□□ 0.64
CPNE1-220ENST00000458038 IGKV3D-15A0A087WSY6 115 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 SHISA9B4DS77 424 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 GUSBP08236 651 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 MATN1P21941 496 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 DIO1P49895 249 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 RNF144AP50876 292 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-220ENST00000458038 CDH11P55287 796 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 DSCR9P59020 149 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 HBA1P69905 142 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 ARHGAP11BQ3KRB8 267 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 EIF3MQ7L2H7 374 aaKnown RBP19.03■□□□□ 0.64
CPNE1-220ENST00000458038 MTDHQ86UE4 582 aaKnown RBP19.03■□□□□ 0.64
CPNE1-220ENST00000458038 ZHX1-C8orf76Q96EF9 292 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 ADAD1Q96M93 576 aaKnown RBP19.03■□□□□ 0.64
CPNE1-220ENST00000458038 ACER3Q9NUN7 267 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 EXD2Q9NVH0 621 aa19.03■□□□□ 0.64
CPNE1-220ENST00000458038 SPIN1Q9Y657 262 aaPredicted RBP19.03■□□□□ 0.64
CPNE1-220ENST00000458038 OR5H1A6NKK0 313 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 SULT2B1O00204 365 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 GPR171O14626 319 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 ANKRD28O15084 1053 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 RAMP1O60894 148 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 AGR2O95994 175 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 CSTAP01040 98 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 IGHV1-2P23083 117 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 APOBEC1P41238 236 aaKnown RBP19.02■□□□□ 0.64
CPNE1-220ENST00000458038 SESN3P58005 492 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 MERTKQ12866 999 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 GPR68Q15743 365 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 SMU1Q2TAY7 513 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 FBXW9Q5XUX1 488 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 AP1ARQ63HQ0 302 aa19.02■□□□□ 0.64
CPNE1-220ENST00000458038 TMEM108Q6UXF1 575 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms