RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MFFQ9GZY8 342 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 RNASET2O00584 256 aaKnown RBP18.42■□□□□ 0.54
SNX27-204ENST00000458013 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
SNX27-204ENST00000458013 SYPP08247 313 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 DEFB103AP81534 67 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 SF3A2Q15428 464 aaKnown RBP18.42■□□□□ 0.54
SNX27-204ENST00000458013 LYPD4Q6UWN0 246 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 PARS2Q7L3T8 475 aaKnown RBP18.42■□□□□ 0.54
SNX27-204ENST00000458013 MYH13Q9UKX3 1938 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 C2orf72A6NCS6 295 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 MED6O75586 246 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 CBR1P16152 277 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 PRKACAP17612 351 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 CCR7P32248 378 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 VEGFCP49767 419 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 MS4A15Q8N5U1 240 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 PARP16Q8N5Y8 322 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 SIMC1Q8NDZ2 872 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 EGLN2Q96KS0 407 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 MYADMQ96S97 322 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 PCDHB10Q9UN67 800 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 CGB2Q6NT52 195 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 PDZD3Q86UT5 571 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 C12orf45Q8N5I9 185 aaPredicted RBP18.42■□□□□ 0.54
SNX27-204ENST00000458013 OR5D18Q8NGL1 313 aa18.42■□□□□ 0.54
SNX27-204ENST00000458013 K7EPK0 472 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 CRABP1P29762 137 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 TRIM61Q5EBN2 209 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 PRAMEF20Q5VT98 475 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 METTL11BQ5VVY1 283 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 OLIG3Q7RTU3 272 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 FAM71E2Q8N5Q1 922 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 FAM160A2Q8N612 972 aaPredicted RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 FNDC9Q8TBE3 224 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 GPR148Q8TDV2 347 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 OR10A5Q9H207 317 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 OR10A2Q9H208 303 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 SLA2Q9H6Q3 261 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 A0A0B4J2A0 478 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 PRSS38A1L453 326 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 H3BUI4 141 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 POLR1CO15160 346 aaPredicted RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 ITGB2P05107 769 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 LTBQ06643 244 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 RANGRFQ9HD47 186 aaPredicted RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 TAS2R8Q9NYW2 309 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 SHPKQ9UHJ6 478 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 SLC10A3P09131 477 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 BMP2P12643 396 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 EMX1Q04741 257 aaPredicted RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 ZBTB8AQ96BR9 441 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 BCL7BQ9BQE9 202 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 INIPQ9NRY2 104 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 DCAF13Q9NV06 445 aaKnown RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 KLHL13Q9P2N7 655 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 ZNF750Q32MQ0 723 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 GM2AP17900 193 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 ZNF300Q96RE9 604 aaPredicted RBP18.41■□□□□ 0.54
SNX27-204ENST00000458013 HOXD1Q9GZZ0 328 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 SLC6A17Q9H1V8 727 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 MKS1Q9NXB0 559 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 HSPE1-MOB4S4R3N1 261 aa18.41■□□□□ 0.54
SNX27-204ENST00000458013 LOC285095A0A1B0GVY8 99 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 CRYZL1O95825 349 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 BMPR1AP36894 532 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 EMP2P54851 167 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 FXNQ16595 210 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 PGM2L1Q6PCE3 622 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 OR5M1Q8NGP8 315 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 TXNDC15Q96J42 360 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 ELOVL3Q9HB03 270 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 NFAT5O94916 1531 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 TSPAN11A1L157 253 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 SCAF4O95104 1147 aaKnown RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 APBB3O95704 486 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 CSF1P09603 554 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 MGST1P10620 155 aaKnown RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 GDPD1Q8N9F7 314 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 GGHQ92820 318 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 CBLCQ9ULV8 474 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 ANTXRLA6NF34 631 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 PTTG1O95997 202 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 LTB4RQ15722 352 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 BCL7AQ4VC05 210 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 FCRLAQ7L513 359 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 DCP2Q8IU60 420 aaKnown RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 RSPRY1Q96DX4 576 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 BMFQ96LC9 184 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 ANKRD60Q9BZ19 345 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 OR52D1Q9H346 318 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 CEPT1Q9Y6K0 416 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 EFCAB7A8K855 629 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 GASTP01350 101 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 POU3F1Q03052 451 aaPredicted RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 MELKQ14680 651 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 C2orf76Q3KRA6 126 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 SULF2Q8IWU5 870 aa18.4■□□□□ 0.54
SNX27-204ENST00000458013 MRPL22Q9NWU5 206 aaKnown RBP18.4■□□□□ 0.54
SNX27-204ENST00000458013 SLC23A2Q9UGH3 650 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms