RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 C16orf89Q6UX73 402 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 CLEC18BQ6UXF7 455 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 B3GNT6Q6ZMB0 384 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 PGAM4Q8N0Y7 254 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 CLEC18CQ8NCF0 446 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 PHF10Q8WUB8 498 aaKnown RBP16.42■□□□□ 0.22
TRIM13-206ENST00000457662 ZNF524Q96C55 264 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 DMRTA2Q96SC8 542 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
TRIM13-206ENST00000457662 ALG2Q9H553 416 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 SERINC1Q9NRX5 453 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 ADA2Q9NZK5 511 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 USP22Q9UPT9 525 aa16.42■□□□□ 0.22
TRIM13-206ENST00000457662 B2RBV5 119 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 H0Y3Z8 333 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 AP3D1O14617 1153 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 TPST1O60507 370 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 C8BP07358 591 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 APOBEC1P41238 236 aaKnown RBP16.41■□□□□ 0.22
TRIM13-206ENST00000457662 HTR3AP46098 478 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 GSK3BP49841 420 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 COPZ1P61923 177 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 MERTKQ12866 999 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 C1orf185Q5T7R7 199 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 CHMP1BQ7LBR1 199 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 GRINAQ7Z429 371 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 UBQLNLQ8IYU4 475 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 LILRA2Q8N149 483 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 TNIP2Q8NFZ5 429 aa16.41■□□□□ 0.22
TRIM13-206ENST00000457662 DIDO1Q9BTC0 2240 aaKnown RBP16.41■□□□□ 0.22
TRIM13-206ENST00000457662 GJE1A6NN92 205 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SYT5O00445 386 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 EFNA2O43921 213 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 EPPINO95925 133 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 T-ENOLP0DO92 83 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 KDELR2P33947 212 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SLC1A3P43003 542 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 KCNJ5P48544 419 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 RPS3AP61247 264 aaKnown RBP16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SLC25A3Q00325 362 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SRSF1Q07955 248 aaKnown RBP eCLIP16.4■□□□□ 0.22
TRIM13-206ENST00000457662 DUSP7Q16829 419 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 RTL6Q6ICC9 239 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 PLEKHM3Q6ZWE6 761 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SMYD1Q8NB12 490 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 SMPDL3BQ92485 455 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 TAMM41Q96BW9 452 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 KCTD14Q9BQ13 255 aaPredicted RBP16.4■□□□□ 0.22
TRIM13-206ENST00000457662 TTYH2Q9BSA4 534 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 CALHM2Q9HA72 323 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 FAM215AQ9Y5M1 114 aa16.4■□□□□ 0.22
TRIM13-206ENST00000457662 CD8B2A6NJW9 211 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 GSTA4O15217 222 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 LGI1O95970 557 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 OPN1SWP03999 348 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 PRG2P13727 222 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
TRIM13-206ENST00000457662 SUCLG1P53597 346 aaKnown RBP16.39■□□□□ 0.21
TRIM13-206ENST00000457662 CLDN15P56746 228 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 CLDN20P56880 219 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 SELENBP1Q13228 472 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 ACSF3Q4G176 576 aaPredicted RBP16.39■□□□□ 0.21
TRIM13-206ENST00000457662 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 WBP2NLQ6ICG8 309 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 ESPNLQ6ZVH7 1005 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 CCDC120Q96HB5 630 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 UCN2Q96RP3 112 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 CDRT15Q96T59 188 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 TUBA1CQ9BQE3 449 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 ADAM19Q9H013 955 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 RELNP78509 3460 aa16.39■□□□□ 0.21
TRIM13-206ENST00000457662 WIPF3A6NGB9 483 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 ADAMDEC1O15204 470 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 SEC14L5O43304 696 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 LDLRP01130 860 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 GLI4P10075 376 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 IL11P20809 199 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 MAP2K6P52564 334 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 SMSP52788 366 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 PMPCAQ10713 525 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 SAMD4BQ5PRF9 694 aaKnown RBP16.38■□□□□ 0.21
TRIM13-206ENST00000457662 PDSS1Q5T2R2 415 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 NSUN5P2Q63ZY6 315 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 RPTNQ6XPR3 784 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 ADGRE4PQ86SQ3 457 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 GGNQ86UU5 652 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 LACC1Q8IV20 430 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 DEFB107AQ8IZN7 70 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 RND1Q92730 232 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 TRIB1Q96RU8 372 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 CTPS2Q9NRF8 586 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 PAQR5Q9NXK6 330 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-206ENST00000457662 GMPR2Q9P2T1 348 aaKnown RBP16.38■□□□□ 0.21
TRIM13-206ENST00000457662 BAG5Q9UL15 447 aa16.38■□□□□ 0.21
TRIM13-206ENST00000457662 SPIN1Q9Y657 262 aaPredicted RBP16.38■□□□□ 0.21
TRIM13-206ENST00000457662 PHF3Q92576 2039 aaKnown RBP16.38■□□□□ 0.21
TRIM13-206ENST00000457662 FLNCQ14315 2725 aa16.37■□□□□ 0.21
TRIM13-206ENST00000457662 H0YC42 278 aa16.37■□□□□ 0.21
TRIM13-206ENST00000457662 CXCR6O00574 342 aa16.37■□□□□ 0.21
TRIM13-206ENST00000457662 EIF1AYO14602 144 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms