RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 UBTD1Q9HAC8 227 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 UGT1A7Q9HAW7 530 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 UGT1A10Q9HAW8 530 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 UGT1A8Q9HAW9 530 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 GBA2Q9HCG7 927 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 IL1RAPQ9NPH3 570 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM138Q9NPI0 162 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 TMEM9Q9P0T7 183 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 ZNF282Q9UDV7 671 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 SMPXQ9UHP9 88 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 KCNJ14Q9UNX9 436 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 EXO1Q9UQ84 846 aaKnown RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 FOXA2Q9Y261 457 aaPredicted RBP4.98□□□□□ -1.61
VPS41-209ENST00000457055 ZNF337Q9Y3M9 751 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 MMP24Q9Y5R2 645 aa4.98□□□□□ -1.61
VPS41-209ENST00000457055 EMSYQ7Z589 1322 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 USP42Q9H9J4 1324 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 RANBP2P49792 3224 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 KTN1Q86UP2 1357 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR2W5A6NFC9 320 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 UNC119BA6NIH7 251 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 NKX6-3A6NJ46 265 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 HEPACAM2A8MVW5 462 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PSMD12O00232 456 aaPredicted RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 EEF2KO00418 725 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 RFXANKO14593 260 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PRMT5O14744 637 aaPredicted RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 N4BP1O75113 896 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 ENTPD5O75356 428 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 DCTN3O75935 186 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 AP2A1O95782 977 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ALDOAP04075 364 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 PROS1P07225 676 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 KLK3P07288 261 aaPredicted RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 HOXC6P09630 235 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SCGB1A1P11684 91 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 NQO1P15559 274 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 GOT1P17174 413 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PSMB5P28074 263 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR1D2P34982 312 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ARR3P36575 388 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 FMO5P49326 533 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 CYB561P49447 251 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ACOT2P49753 483 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 VEGFCP49767 419 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 VAV2P52735 878 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PLA2G16P53816 162 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 UCNP55089 124 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 LSM6P62312 80 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 KCNJ2P63252 427 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 NAAAQ02083 359 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ACSM2AQ08AH3 577 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 MTM1Q13496 603 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 RAB31Q13636 194 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ARHGEF7Q14155 803 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 CSRP2Q16527 193 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 MICBQ29980 383 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SLC36A2Q495M3 483 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ACSM2BQ68CK6 577 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PRR5LQ6MZQ0 368 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 KCNIP4Q6PIL6 250 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 LINGO4Q6UY18 593 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ASCL4Q6XD76 172 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 MED25Q71SY5 747 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SLC16A9Q7RTY1 509 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TIPARPQ7Z3E1 657 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 LYG2Q86SG7 212 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TRABD2AQ86V40 505 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TGIF2LXQ8IUE1 241 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 KLHDC8AQ8IYD2 350 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PARP8Q8N3A8 854 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ZCCHC9Q8N567 271 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 TMEM156Q8N614 296 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PTGR2Q8N8N7 351 aaPredicted RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 PXT1Q8NFP0 134 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR51D1Q8NGF3 324 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR13C5Q8NGS8 318 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR9A2Q8NGT5 310 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 OR51A7Q8NH64 312 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 GIPC3Q8TF64 312 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 U2AF1L4Q8WU68 220 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 ZNF480Q8WV37 535 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 GLYATL1Q969I3 302 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SLC35C1Q96A29 364 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 ARRDC3Q96B67 414 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TM4SF19Q96DZ7 209 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SMIM12Q96EX1 92 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 PRAP1Q96NZ9 151 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 STACQ99469 402 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 RNF2Q99496 336 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SERPINI1Q99574 410 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 CPNE1Q99829 537 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 NUDT22Q9BRQ3 303 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 FEM1AQ9BSK4 669 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 TRMOQ9BU70 441 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 GTPBP2Q9BX10 602 aaKnown RBP4.97□□□□□ -1.61
VPS41-209ENST00000457055 FTHL17Q9BXU8 183 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 R3HDMLQ9H3Y0 253 aa4.97□□□□□ -1.61
VPS41-209ENST00000457055 RHOFQ9HBH0 211 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms