RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 AKAP6Q13023 2319 aa15.57■□□□□ 0.08
USP39-208ENST00000455732 ABCA4P78363 2273 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 A0A1W2PNV4 684 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 TMEM247A6NEH6 219 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 CLDN24A6NM45 220 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 GJE1A6NN92 205 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 EFNA2O43921 213 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 CYP7B1O75881 506 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 TNFSF13O75888 250 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 BCHEP06276 602 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 PEX19P40855 299 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 EIF1AXP47813 144 aaKnown RBP15.56■□□□□ 0.08
USP39-208ENST00000455732 SLC6A8P48029 635 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 ARFIP2P53365 341 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 GUSBP1Q15486 140 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 PDSS1Q5T2R2 415 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 DLEU7Q6UYE1 221 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 PEX5LQ8IYB4 626 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 GCNT2Q8N0V5 402 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 LILRA2Q8N149 483 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 FNDC9Q8TBE3 224 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 TMEM234Q8WY98 164 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 RNASE6Q93091 150 aaKnown RBP15.56■□□□□ 0.08
USP39-208ENST00000455732 LRRC46Q96FV0 321 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 TMEM19Q96HH6 336 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 PIGMQ9H3S5 423 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 TMEM185BQ9H7F4 350 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 BCL2L10Q9HD36 194 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 ACER3Q9NUN7 267 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 DNAJB12Q9NXW2 375 aaKnown RBP15.56■□□□□ 0.08
USP39-208ENST00000455732 CORO2BQ9UQ03 480 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 NDUFAF1Q9Y375 327 aa15.56■□□□□ 0.08
USP39-208ENST00000455732 A0A0G2JPF8 293 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 A0A0J9YW62 118 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 HNRNPCL2B2RXH8 293 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 HNRNPCL3B7ZW38 293 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 FAAHO00519 579 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 TNFSF11O14788 317 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 HNRNPCL1O60812 293 aaKnown RBP15.55■□□□□ 0.08
USP39-208ENST00000455732 THBS1P07996 1170 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 HNRNPCL4P0DMR1 293 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 AGFG1P52594 562 aaKnown RBP15.55■□□□□ 0.08
USP39-208ENST00000455732 SESN3P58005 492 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 SNTB1Q13884 538 aaKnown RBP15.55■□□□□ 0.08
USP39-208ENST00000455732 SGCBQ16585 318 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 ZSWIM7Q19AV6 140 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 LIN52Q52LA3 116 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 C3orf33Q6P1S2 294 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 HMGN2P46Q86SG4 172 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 ZNF317Q96PQ6 595 aaPredicted RBP15.55■□□□□ 0.08
USP39-208ENST00000455732 PRDM4Q9UKN5 801 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 PACSIN3Q9UKS6 424 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 MCTS1Q9ULC4 181 aaKnown RBP15.55■□□□□ 0.08
USP39-208ENST00000455732 AKAP9Q99996 3911 aa15.55■□□□□ 0.08
USP39-208ENST00000455732 CELSR1Q9NYQ6 3014 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 EEF1E1-BLOC1S5C9J1V9 151 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 ANGPT2O15123 496 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 EEF1E1O43324 174 aaKnown RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 ADAM11O75078 769 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 NUDT7P0C024 238 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 IL7RP16871 459 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 GPX2P18283 190 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 SHC1P29353 583 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 UQCRC1P31930 480 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 SFTPDP35247 375 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 GCNT6Q5T4J0 391 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 MRPL2Q5T653 305 aaKnown RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 RNF220Q5VTB9 566 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 HBMQ6B0K9 141 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 RETREG3Q86VR2 466 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 ZNF440Q8IYI8 595 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 OR52P1PQ8NH57 321 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 BBS10Q8TAM1 723 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 CNOT9Q92600 299 aaKnown RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 ZNF559Q9BR84 538 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 CPPED1Q9BRF8 314 aaPredicted RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 KLHL14Q9P2G3 628 aa15.54■□□□□ 0.08
USP39-208ENST00000455732 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 ZNF443Q9Y2A4 671 aaPredicted RBP15.54■□□□□ 0.08
USP39-208ENST00000455732 CDHR4A6H8M9 788 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 CXCL13O43927 109 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 AQP8O94778 261 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 OPN1LWP04000 364 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 ARAFP10398 606 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 SORDQ00796 357 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 MYBPHQ13203 477 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 RPS26P11Q5JNZ5 115 aaPredicted RBP15.53■□□□□ 0.08
USP39-208ENST00000455732 ZNF836Q6ZNA1 936 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 PLEKHM3Q6ZWE6 761 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 GRINAQ7Z429 371 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 DHDDSQ86SQ9 333 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 C10orf111Q8N326 155 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 SLC25A43Q8WUT9 341 aaPredicted RBP15.53■□□□□ 0.08
USP39-208ENST00000455732 OSTF1Q92882 214 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 MAL2Q969L2 176 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 CPNE4Q96A23 557 aaPredicted RBP15.53■□□□□ 0.08
USP39-208ENST00000455732 CCDC106Q9BWC9 280 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 IKZF5Q9H5V7 419 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 TMEM38AQ9H6F2 299 aa15.53■□□□□ 0.08
USP39-208ENST00000455732 COQ10BQ9H8M1 238 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms