RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 CA5AP35218 305 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 OPN5Q6U736 354 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 B3GLCTQ6Y288 498 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 RBM45Q8IUH3 476 aaKnown RBP9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 OR5W2Q8NH69 310 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 DUSP19Q8WTR2 217 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 UBE2FQ969M7 185 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SLC17A4Q9Y2C5 497 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PPM1DO15297 605 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 YY2O15391 372 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 BMP1P13497 986 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ZNF28P17035 718 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 CTBP2P56545 445 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 HSD17B7P56937 341 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 C1QTNF12Q5T7M4 302 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ZNF613Q6PF04 617 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SYCE2Q6PIF2 218 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 IL20RBQ6UXL0 311 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 MED25Q71SY5 747 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ZNF100Q8IYN0 542 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 OR8S1Q8NH09 359 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 LCORQ96JN0 433 aaPredicted RBP9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SLC46A1Q96NT5 459 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 TRPV4Q9HBA0 871 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 DUSP22Q9NRW4 184 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 VNN3Q9NY84 501 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 MMACHCQ9Y4U1 282 aa9.35□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PLXNB2O15031 1838 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 LOC105369274A0A096LPK9 316 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 LOC102723532A0A0G2JNH3 316 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 A0A0X1KG70 313 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 EFCAB7A8K855 629 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SLC16A7O60669 478 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 APOC1P02654 83 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 YES1P07947 543 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ERCC1P07992 297 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ACP2P11117 423 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 GABRG2P18507 467 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 CD1CP29017 333 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 BSGP35613 385 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 GPLD1P80108 840 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 EEF1A2Q05639 463 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PRSS36Q5K4E3 855 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 GPR139Q6DWJ6 353 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ETFBKMTQ8IXQ9 262 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 OR4N4Q8N0Y3 316 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ATOH1Q92858 354 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 INTS14Q96SY0 518 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 KATNB1Q9BVA0 655 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ULBP3Q9BZM4 244 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PCDHB16Q9NRJ7 776 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SACM1LQ9NTJ5 587 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 BABAM2Q9NXR7 383 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ZNF69Q9UC07 566 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 MED16Q9Y2X0 877 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 TNS1Q9HBL0 1735 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 A6NIZ1 184 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SIGLEC6O43699 453 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 RAD1O60671 282 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PSMB10P40306 273 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 RAP1BP61224 184 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 RAP1AP62834 184 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SRYQ05066 204 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 KDM4DQ6B0I6 523 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SLC25A25Q6KCM7 469 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 KIAA1958Q8N8K9 716 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 BAHD1Q8TBE0 780 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SLCO4A1Q96BD0 722 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 TNFRSF13CQ96RJ3 184 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PLA2G2FQ9BZM2 168 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 NRSN2Q9GZP1 204 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 FANCFQ9NPI8 374 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SH2B3Q9UQQ2 575 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 NOP16Q9Y3C1 178 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SCN4AP35499 1836 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 GJE1A6NN92 205 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 FGF17O60258 216 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PLATP00750 562 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 GTF2F2P13984 249 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 CFL1P23528 166 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 STOMP27105 288 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 TACR3P29371 465 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 TRHRP34981 398 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 PCM1Q15154 2024 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 SMAD2Q15796 467 aaKnown RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 AKIRIN2Q53H80 203 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 XKRXQ6PP77 449 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 ZNF322Q6U7Q0 402 aaPredicted RBP9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 MBOAT2Q6ZWT7 520 aa9.34□□□□□ -0.91
CSGALNACT1-203ENST00000454498 LRRC56Q8IYG6 542 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms