RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 ABCB9Q9NP78 766 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 BABAM2Q9NXR7 383 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 TMEM184BQ9Y519 407 aaPredicted RBP16.73■□□□□ 0.27
MECP2-205ENST00000453960 EYSQ5T1H1 3165 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 PRR23D1E9PI22 279 aaPredicted RBP16.73■□□□□ 0.27
MECP2-205ENST00000453960 LMO7DNF2Z398 122 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 RGS5O15539 181 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 PRR23D2P0DMB1 279 aaPredicted RBP16.73■□□□□ 0.27
MECP2-205ENST00000453960 CELP19835 753 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 PTNP21246 168 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 PTBP1P26599 531 aaKnown RBP eCLIP16.73■□□□□ 0.277e-8■■□□□ 12.6
MECP2-205ENST00000453960 SLC6A6P31641 620 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 MAT1AQ00266 395 aaKnown RBP16.73■□□□□ 0.27
MECP2-205ENST00000453960 MXD1Q05195 221 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 RIN1Q13671 783 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 ALG10BQ5I7T1 473 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 DDI2Q5TDH0 399 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 FNDC7Q5VTL7 733 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 ZC3H14Q6PJT7 736 aaKnown RBP16.73■□□□□ 0.27
MECP2-205ENST00000453960 KIRREL2Q6UWL6 708 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 CARFQ8N187 725 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 GDPD1Q8N9F7 314 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 ATP6V1C2Q8NEY4 427 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 OR7G1Q8NGA0 311 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 PTCHD1Q96NR3 888 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 SLC38A3Q99624 504 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 ALG8Q9BVK2 526 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 IFT27Q9BW83 186 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 OR10A5Q9H207 317 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 MED20Q9H944 212 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 TOR4AQ9NXH8 423 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 CHRNA9Q9UGM1 479 aa16.73■□□□□ 0.27
MECP2-205ENST00000453960 A0A087WUJ7 227 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 A0A1W2PQL4 384 aaPredicted RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 SHISA3A0PJX4 238 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 SERINC4A6NH21 518 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 SBK2P0C263 348 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 SAGP10523 405 aaPredicted RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 HK1P19367 917 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 SRSF5Q13243 272 aaKnown RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 ZNF267Q14586 743 aaPredicted RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 ISXQ2M1V0 245 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.72■□□□□ 0.279e-7■■■□□ 17.7
MECP2-205ENST00000453960 ARHGAP11AQ6P4F7 1023 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 METAP1DQ6UB28 335 aaPredicted RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 ZNF440Q8IYI8 595 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 TMEM99Q8N816 258 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 BCORP1Q8N888 145 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 ZFP41Q8N8Y5 198 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 IL17RDQ8NFM7 739 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 LMX1AQ8TE12 382 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 GRHL3Q8TE85 626 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 TNFRSF13CQ96RJ3 184 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 TPSD1Q9BZJ3 242 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 ISG20L2Q9H9L3 353 aaKnown RBP16.72■□□□□ 0.27
MECP2-205ENST00000453960 ADGRL4Q9HBW9 690 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 LANCL2Q9NS86 450 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 PRODH2Q9UF12 536 aa16.72■□□□□ 0.27
MECP2-205ENST00000453960 GON4LQ3T8J9 2241 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 TRAV27A0A087WT01 109 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 IGHV5-51A0A0C4DH38 117 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 RIIAD1A6NNX1 92 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 GTPBP1O00178 669 aaKnown RBP16.71■□□□□ 0.27
MECP2-205ENST00000453960 POLR1CO15160 346 aaPredicted RBP16.71■□□□□ 0.27
MECP2-205ENST00000453960 RNF13O43567 381 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 PLPP2O43688 288 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 HYAL3O43820 417 aaPredicted RBP16.71■□□□□ 0.27
MECP2-205ENST00000453960 DLGAP3O95886 979 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 IL7P13232 177 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 GPR143P51810 404 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 GGTLC2Q14390 218 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 BAK1Q16611 211 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 KLHL26Q53HC5 615 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 SLC35F1Q5T1Q4 408 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 OAFQ86UD1 273 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 KLBQ86Z14 1044 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 GPALPP1Q8IXQ4 340 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 OR51Q1Q8NH59 317 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 OR4C6Q8NH72 309 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 SLC19A3Q9BZV2 496 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 PDE7BQ9NP56 450 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 C14orf119Q9NWQ9 140 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 SEMA5BQ9P283 1151 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 ERVK-19Q9WJR5 959 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 MMACHCQ9Y4U1 282 aa16.71■□□□□ 0.27
MECP2-205ENST00000453960 SIRT4Q9Y6E7 314 aaPredicted RBP16.71■□□□□ 0.27
MECP2-205ENST00000453960 HLA-DQB1P01920 261 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 APOA1P02647 267 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 ZNF3P17036 446 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 ATP6V1E1P36543 226 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 MLLT3P42568 568 aaPredicted RBP16.7■□□□□ 0.26
MECP2-205ENST00000453960 GFERP55789 205 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 NXPH1P58417 271 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 PPP3R1P63098 170 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 POU4F2Q12837 409 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 ASAH1Q13510 395 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 CRMP1Q14194 572 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 TRAM1Q15629 374 aa16.7■□□□□ 0.26
MECP2-205ENST00000453960 ZMAT1Q5H9K5 638 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms