RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KCTD12Q96CX2 325 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 DTD2Q96FN9 168 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 GPR137Q96N19 417 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 RBP7Q96R05 134 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF471Q9BX82 626 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 C1QTNF2Q9BXJ5 285 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 ZDHHC5Q9C0B5 715 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 GHITMQ9H3K2 345 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 FN3KQ9H479 309 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 ACSS1Q9NUB1 689 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 TNS1Q9HBL0 1735 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 PTPRDP23468 1912 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 RAD1O60671 282 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 TLX1P31314 330 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 MNDAP41218 407 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 CAMK2DQ13557 499 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 PUS10Q3MIT2 529 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 AADACL4Q5VUY2 407 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 SCMH1Q96GD3 660 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 TEAD3Q99594 435 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 GDF15Q99988 308 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 HMX1Q9NP08 348 aaPredicted RBP12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 AIFM1O95831 613 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 DRD2P14416 443 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 LIMK1P53667 647 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 NNATQ16517 81 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 TMEM150AQ86TG1 271 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 BPIFA2Q96DR5 249 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 ISYNA1Q9NPH2 558 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 RNF186Q9NXI6 227 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 SLC39A1Q9NY26 324 aa12.89□□□□□ -0.35
UBE2D3-210ENST00000453744 GRXCR1A8MXD5 290 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 NPC1O15118 1278 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TGM5O43548 720 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 RRASP10301 218 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 GTF2F2P13984 249 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 HOXD10P28358 340 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SCGB2B2Q4G0G5 96 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 PLPP4Q5VZY2 271 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 OR4E2Q8NGC2 313 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SYNPRQ8TBG9 265 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 MRPL48Q96GC5 212 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TRMT2BQ96GJ1 504 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SORCS2Q96PQ0 1159 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 PCBD2Q9H0N5 130 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 PTTG3PQ9NZH4 202 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 LIPT1Q9Y234 373 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 H7C2Y5 167 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 PAK4O96013 591 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 FPR3P25089 353 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 AKR1C2P52895 323 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 AKR1C1Q04828 323 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TAF13Q15543 124 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 PCGF3Q3KNV8 242 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 MPP7Q5T2T1 576 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 NR2C2APQ86WQ0 139 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 NOX4Q9NPH5 578 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 MYEF2Q9P2K5 600 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 OR10H1Q9Y4A9 318 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 HRH3Q9Y5N1 445 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 RBBP9O75884 186 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 ANKRD34CP0C6C1 535 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF35P13682 527 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SORDQ00796 357 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 FOXK2Q01167 660 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 YOD1Q5VVQ6 348 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 Q6ZNB5 142 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TRILQ7L0X0 811 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TMEFF1Q8IYR6 380 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 CMTM4Q8IZR5 234 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 ZNF676Q8N7Q3 588 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 POGLUT1Q8NBL1 392 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 CCDC86Q9H6F5 360 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 ICKQ9UPZ9 632 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TRAPPC13A5PLN9 417 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 CTSLP07711 333 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 RAB33AQ14088 237 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 NIPAL3Q6P499 406 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 MBOAT2Q6ZWT7 520 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 CNRIP1Q96F85 164 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SLC23A2Q9UGH3 650 aa12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 FARSAQ9Y285 508 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-210ENST00000453744 SCN2AQ99250 2005 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 MEIKINA0A087WXM9 373 aa12.87□□□□□ -0.35
UBE2D3-210ENST00000453744 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms