RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TOMM34Q15785 309 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 CTU2Q2VPK5 515 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ALG10BQ5I7T1 473 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 DCAF10Q5QP82 559 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 SWT1Q5T5J6 900 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF468Q5VIY5 522 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 B3GNTL1Q67FW5 361 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 BICRALQ6AI39 1079 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 WBP2NLQ6ICG8 309 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ULK3Q6PHR2 472 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 OPN5Q6U736 354 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 IL20RBQ6UXL0 311 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF730Q6ZMV8 503 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 TMPRSS11FQ6ZWK6 438 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ATG4DQ86TL0 474 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF227Q86WZ6 799 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 MEX3DQ86XN8 651 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 KIF18BQ86Y91 864 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 MISPQ8IVT2 679 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 NRMQ8IXM6 262 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 CADM2Q8N3J6 435 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF555Q8NEP9 628 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 OR5W2Q8NH69 310 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 PFN4Q8NHR9 129 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 B4GALNT2Q8NHY0 566 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 BRIX1Q8TDN6 353 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 GPR119Q8TDV5 335 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 DNAJA4Q8WW22 397 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 TMEM239Q8WW34 195 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 UBE2FQ969M7 185 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 SH3YL1Q96HL8 342 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 FAM46AQ96IP4 442 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 MPP4Q96JB8 637 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 HS6ST2Q96MM7 605 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 FRMD6Q96NE9 622 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 IP6K3Q96PC2 410 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 CCNL2Q96S94 520 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 DSN1Q9H410 356 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 RIBC2Q9H4K1 309 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 GPN2Q9H9Y4 310 aaPredicted RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF556Q9HAH1 456 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 C12orf10Q9HB07 376 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 GALNT9Q9HCQ5 603 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ATP13A2Q9NQ11 1180 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 C20orf141Q9NUB4 165 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 WASF3Q9UPY6 502 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 ORC6Q9Y5N6 252 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 URB1O60287 2271 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 APC2O95996 2303 aa5.47□□□□□ -1.53
SDC4P-201ENST00000453285 PHF3Q92576 2039 aaKnown RBP5.47□□□□□ -1.53
SDC4P-201ENST00000453285 MAGEA13PA6NCF6 341 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ANKUB1A6NFN9 424 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ETV2O00321 342 aaPredicted RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CDC42EP2O14613 210 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 BCKDKO14874 412 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 PTP4A3O75365 173 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CCL3P10147 92 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 IFI30P13284 250 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 GABRB1P18505 474 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 FUT1P19526 365 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 PGCP20142 388 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 PTNP21246 168 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 GSTM3P21266 225 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 FPR3P25089 353 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ELK4P28324 431 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 TACR3P29371 465 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 IFNGR2P38484 337 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SLC1A3P43003 542 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 GPR4P46093 362 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SSR4P51571 173 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 RPS6KA3P51812 740 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CHN2P52757 468 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SUMO3P55854 103 aaPredicted RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SOX8P57073 446 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 FXYD6P3P58550 94 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 COPZ1P61923 177 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 EFNB1P98172 346 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CDK5Q00535 292 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 EGR4Q05215 589 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CLN3Q13286 438 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 CDK5R2Q13319 367 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SNTA1Q13424 505 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 FHL1Q13642 323 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 PTGES3Q15185 160 aaKnown RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 QPRTQ15274 297 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 INPP5JQ15735 1006 aaPredicted RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 MEP1AQ16819 746 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 COL28A1Q2UY09 1125 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SLC25A53Q5H9E4 307 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ACER2Q5QJU3 275 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ATP1A1-AS1Q5TC04 95 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 SLX4IPQ5VYV7 408 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 TMEM236Q5W0B7 351 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 C12orf73Q69YU5 71 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 OR5M10Q6IEU7 315 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ACSM5Q6NUN0 579 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 JMJD6Q6NYC1 403 aaPredicted RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 TTC33Q6PID6 262 aaPredicted RBP5.46□□□□□ -1.54
SDC4P-201ENST00000453285 ISLR2Q6UXK2 745 aa5.46□□□□□ -1.54
SDC4P-201ENST00000453285 RASSF6Q6ZTQ3 369 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms