RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TRIP10Q15642 601 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 C3AR1Q16581 482 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF74Q16587 644 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CLPPQ16740 277 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 TPD52L1Q16890 204 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 WDR38Q5JTN6 314 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ATAD3BQ5T9A4 648 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NCR3LG1Q68D85 454 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 C19orf48Q6RUI8 117 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF771Q7L3S4 317 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 FCRLAQ7L513 359 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NAGSQ8N159 534 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 STK40Q8N2I9 435 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CIARTQ8N365 385 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 FAM89BQ8N5H3 189 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 FADS6Q8N9I5 356 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 DMBX1Q8NFW5 382 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 OR1L3Q8NH93 324 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CHPT1Q8WUD6 406 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 HPSE2Q8WWQ2 592 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 FCAMRQ8WWV6 532 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 OR8D1Q8WZ84 308 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 P3H4Q92791 437 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 HIST1H2ACQ93077 130 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NCLNQ969V3 563 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 C10orf90Q96M02 699 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 PRICKLE1Q96MT3 831 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 RPRD1AQ96P16 312 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ZSCAN5AQ9BUG6 496 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 WWP1Q9H0M0 922 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 NEUROG2Q9H2A3 272 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 CXXC4Q9H2H0 198 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 C3orf14Q9HBI5 128 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 FARSBQ9NSD9 589 aaKnown RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 DDIT4Q9NX09 232 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 SMPD3Q9NY59 655 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ERVK-18Q9QC07 812 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 LHX3Q9UBR4 397 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 ELF5Q9UKW6 265 aaPredicted RBP3.75□□□□□ -1.81
LINC00393-202ENST00000452852 DOCK9Q9BZ29 2069 aa3.75□□□□□ -1.81
LINC00393-202ENST00000452852 A0A1B0GTQ1 180 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PRAMEF26H0Y7S4 382 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PES1O00541 588 aaKnown RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ALOX15BO15296 676 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 CLDN11O75508 207 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 SPAG6O75602 509 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 IGLV3-25P01717 112 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 LYNP07948 512 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 RHOCP08134 193 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 TNNI3P19429 210 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ITGA3P26006 1051 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 MAT2AP31153 395 aaKnown RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PTGFRP43088 359 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 MTIF2P46199 727 aaKnown RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 SLC1A6P48664 564 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 NPY2RP49146 381 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 STK19P49842 368 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 UBE2HP62256 183 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 LRRC74AQ0VAA2 488 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ILKQ13418 452 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 EXOC3L4Q17RC7 722 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 POM121L1PQ3SYA9 428 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PDLIM3Q53GG5 364 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 TMEM41BQ5BJD5 291 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 C9orf64Q5T6V5 341 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 SYPL2Q5VXT5 272 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ASPHD2Q6ICH7 369 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 LRRC31Q6UY01 552 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ZNF329Q86UD4 541 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ZDHHC21Q8IVQ6 265 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 GCNT2Q8N0V5 402 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 DEFB106AQ8N104 65 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PARP8Q8N3A8 854 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 METTL27Q8N6F8 245 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 EID2Q8N6I1 236 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 CCDC185Q8N715 623 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 SENP5Q96HI0 755 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 PPP1R16AQ96I34 528 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 C4orf36Q96KX1 117 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 IL12RB2Q99665 862 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 NLNQ9BYT8 704 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ATP13A3Q9H7F0 1226 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 VIPAS39Q9H9C1 493 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 CALHM2Q9HA72 323 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 RDH8Q9NYR8 311 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 FLRT3Q9NZU0 649 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 GRID1Q9ULK0 1009 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 VANGL2Q9ULK5 521 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 STAP1Q9ULZ2 295 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 USP24Q9UPU5 2620 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 FOXJ3Q9UPW0 622 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 KLHDC2Q9Y2U9 406 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 CHD5Q8TDI0 1954 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 TPRP12270 2363 aaKnown RBP3.74□□□□□ -1.81
LINC00393-202ENST00000452852 ANKRD36A6QL64 1941 aa3.74□□□□□ -1.81
LINC00393-202ENST00000452852 TRPM6Q9BX84 2022 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 CHD8Q9HCK8 2581 aa3.73□□□□□ -1.81
LINC00393-202ENST00000452852 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms