RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 APH1AQ96BI3 265 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SMIM10Q96HG1 83 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 NSMCE3Q96MG7 304 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZFP3Q96NJ6 502 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 XPO6Q96QU8 1125 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5B2Q96R09 309 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 TAAR1Q96RJ0 339 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 HSD17B14Q9BPX1 270 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAPKAP1Q9BPZ7 522 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 VN1R1Q9GZP7 353 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PIGUQ9H490 435 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 KIR3DX1Q9H7L2 352 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PNRC2Q9NPJ4 139 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRSS16Q9NQE7 514 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MRPL39Q9NYK5 338 aaKnown RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPR83Q9NYM4 423 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MYO6Q9UM54 1294 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC6A5Q9Y345 797 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 POLR3HQ9Y535 204 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAPK8IP3Q9UPT6 1336 aa3.95□□□□□ -1.78
HMGB3P21-201ENST00000452483 USP47Q96K76 1375 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 A0A0J9YVX5 310 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CCDC182A6NF36 153 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ARGFXA6NJG6 315 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 C2CD4BA6NLJ0 364 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 C15orf62A8K5M9 175 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM114B3SHH9 223 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RNASET2O00584 256 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 DYNC1I1O14576 645 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 NARSO43776 548 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZIC3O60481 467 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAMP3O60896 148 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TNFAIP8O95379 198 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PSMG1O95456 288 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLPIP03973 132 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ALDOBP05062 364 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CT62P0C5K7 136 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR4E1P0C645 316 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ADORA3P0DMS8 318 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACP2P11117 423 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PSMC3P17980 439 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PCSK6P29122 969 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 IFNA8P32881 189 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAGEA6P43360 314 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPR1P46091 355 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CX3CR1P49238 355 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RGS6P49758 472 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RAG2P55895 527 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 NUP107P57740 925 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 NTHL1P78549 312 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CDKL1Q00532 357 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF33AQ06730 810 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZP4Q12836 540 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 NAB1Q13506 487 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 KLF5Q13887 457 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 MEF2DQ14814 521 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PDK2Q15119 407 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMED2Q15363 201 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 C5orf64Q2M2E5 130 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACCSLQ4AC99 568 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACTBL2Q562R1 376 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 DMRTC1Q5HYR2 192 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 AARS2Q5JTZ9 985 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 UTF1Q5T230 341 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 DDI2Q5TDH0 399 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 SPOPLQ6IQ16 392 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRMT9Q6P2P2 845 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 LRRC31Q6UY01 552 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM184AQ6ZMB5 413 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 LANCL3Q6ZV70 420 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TIPARPQ7Z3E1 657 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF677Q86XU0 584 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMEM139Q8IV31 216 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 APRG1Q8IVJ8 170 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZC3H3Q8IXZ2 948 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF34Q8IZ26 560 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM89BQ8N5H3 189 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 CPSF7Q8N684 471 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 LRTM2Q8N967 370 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR4F6Q8NGB9 312 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR6N2Q8NGY6 317 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 MRAPQ8TCY5 172 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 MAGEE2Q8TD90 523 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 GPR151Q8TDV0 419 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PHF10Q8WUB8 498 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TM9SF4Q92544 642 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC35C1Q96A29 364 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 C18orf25Q96B23 403 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 BIRC7Q96CA5 298 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 FAM84BQ96KN1 310 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 SORCS2Q96PQ0 1159 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 RBBP8Q99708 897 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TIMP4Q99727 224 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TIMM29Q9BSF4 260 aa3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TRAF4Q9BUZ4 470 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 PAPOLGQ9BWT3 736 aaKnown RBP3.94□□□□□ -1.78
HMGB3P21-201ENST00000452483 TM2D2Q9BX73 214 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms