RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 PODNL1Q6PEZ8 512 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 C11orf88Q6PI97 169 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 TSSK4Q6SA08 328 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CEACAM19Q7Z692 300 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF546Q86UE3 836 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RBM45Q8IUH3 476 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 LRRC56Q8IYG6 542 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 POMGNT2Q8NAT1 580 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR2AK2Q8NG84 335 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 GPR32P1Q8NGA4 272 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR4K5Q8NGD3 323 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR52I2Q8NH67 350 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CD99L2Q8TCZ2 262 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 GCDHQ92947 438 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 LURAP1Q96LR2 239 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF354BQ96LW1 612 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF75AQ96N20 296 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 MTERF1Q99551 399 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 ORAI3Q9BRQ5 295 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 WDR13Q9H1Z4 485 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 XKR8Q9H6D3 395 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 EGLN3Q9H6Z9 239 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 TMEM185BQ9H7F4 350 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 C2orf42Q9NWW7 574 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 TDRD15B5MCY1 1934 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 CENPFP49454 3210 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 H7C0S8 307 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 SMAD7O15105 426 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR2T1O43869 369 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 LATS1O95835 1130 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ATP1B1P05026 303 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 UCHL1P09936 223 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 APEHP13798 732 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF14P17017 642 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 ATF1P18846 271 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 HTR5AP47898 357 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 LHX1P48742 406 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 PGFP49763 221 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 PNLIPRP2P54317 469 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 UBE2MP61081 183 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF385BQ569K4 471 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF805Q5CZA5 627 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RPS26P11Q5JNZ5 115 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 MARCH8Q5T0T0 291 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 OLFML2AQ68BL7 652 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 REEP3Q6NUK4 255 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 RPL13AP3Q6NVV1 102 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 JMJD6Q6NYC1 403 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 LINGO4Q6UY18 593 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 LRRC69Q6ZNQ3 347 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 SLC29A4Q7RTT9 530 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 IQCHQ86VS3 1027 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CLDN19Q8N6F1 224 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 OR10H5Q8NGA6 315 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 C14orf79Q96F83 325 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 MEGF10Q96KG7 1140 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 CNTNAP3BQ96NU0 1288 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 GPA33Q99795 319 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 BOCQ9BWV1 1114 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 ZNF471Q9BX82 626 aaPredicted RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.01□□□□□ -1.13
LSM5-208ENST00000450169 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 SMCO4Q9NRQ5 59 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 PPP4R1LQ9P1A2 415 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 KLHL9Q9P2J3 617 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 EXOGQ9Y2C4 368 aaKnown RBP8.01□□□□□ -1.13
LSM5-208ENST00000450169 PPP2R3BQ9Y5P8 575 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 PAPPA2Q9BXP8 1791 aa8.01□□□□□ -1.13
LSM5-208ENST00000450169 GABARAPH6UMI1 98 aa8□□□□□ -1.13
LSM5-208ENST00000450169 BCL2L11O43521 198 aa8□□□□□ -1.13
LSM5-208ENST00000450169 FMO6PO60774 539 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PRAMEF4O60810 478 aa8□□□□□ -1.13
LSM5-208ENST00000450169 CELA3AP09093 270 aa8□□□□□ -1.13
LSM5-208ENST00000450169 GKN3PP0CG01 181 aa8□□□□□ -1.13
LSM5-208ENST00000450169 VSIG10L2P0DP72 767 aa8□□□□□ -1.13
LSM5-208ENST00000450169 NQO2P16083 231 aa8□□□□□ -1.13
LSM5-208ENST00000450169 AGTR1P30556 359 aa8□□□□□ -1.13
LSM5-208ENST00000450169 MNDAP41218 407 aa8□□□□□ -1.13
LSM5-208ENST00000450169 CASP6P55212 293 aa8□□□□□ -1.13
LSM5-208ENST00000450169 CXADRP78310 365 aa8□□□□□ -1.13
LSM5-208ENST00000450169 SRSF3P84103 164 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 PIN1Q13526 163 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 MPPED2Q15777 294 aa8□□□□□ -1.13
LSM5-208ENST00000450169 MAPK14Q16539 360 aa8□□□□□ -1.13
LSM5-208ENST00000450169 ZXDCQ2QGD7 858 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 TIGD5Q53EQ6 642 aa8□□□□□ -1.13
LSM5-208ENST00000450169 MS4A13Q5J8X5 152 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PRAMEF9Q5VWM5 478 aa8□□□□□ -1.13
LSM5-208ENST00000450169 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
LSM5-208ENST00000450169 ARL9Q6T311 187 aa8□□□□□ -1.13
LSM5-208ENST00000450169 CERS6Q6ZMG9 384 aa8□□□□□ -1.13
LSM5-208ENST00000450169 MRGPREQ86SM8 312 aa8□□□□□ -1.13
LSM5-208ENST00000450169 TMEM200AQ86VY9 491 aa8□□□□□ -1.13
LSM5-208ENST00000450169 APOBEC3FQ8IUX4 373 aaKnown RBP8□□□□□ -1.13
LSM5-208ENST00000450169 THEM5Q8N1Q8 247 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms