RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 FXYD6-FXYD2A0A087WZ82 144 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 AGAP14A8MT82 685 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 GPR89AB7ZAQ6 455 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 KRBOX1C9JBD0 128 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 SLC2A10O95528 541 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 GPR89BP0CG08 455 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ALPPL2P10696 532 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ATP1B2P14415 290 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 C4BPBP20851 252 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 PTBP1P26599 531 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 SMIM11AP58511 58 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 COL9A2Q14055 689 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 SLC25A35Q3KQZ1 300 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 MINDY4Q4G0A6 757 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 HBMQ6B0K9 141 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 GRHL2Q6ISB3 625 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 PYHIN1Q6K0P9 492 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 FAAP20Q6NZ36 180 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 Q6ZTK2 550 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 CEACAM19Q7Z692 300 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 LRRTM4Q86VH4 590 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ARIH2OSQ8N7S6 290 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 FRMD1Q8N878 549 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ZNF454Q8N9F8 522 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 OR10H4Q8NGA5 316 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 OR6T1Q8NGN1 323 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ZNF671Q8TAW3 534 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ADAMTS14Q8WXS8 1223 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ACOT12Q8WYK0 555 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 FCRL1Q96LA6 429 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ZNF354BQ96LW1 612 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 RSPO3Q9BXY4 272 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 SHARPINQ9H0F6 387 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 FXYD6Q9H0Q3 95 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 AUNIPQ9H7T9 357 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 TEX10Q9NXF1 929 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 STOX2Q9P2F5 926 aaPredicted RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 ZMAT5Q9UDW3 170 aaKnown RBP7.54□□□□□ -1.2
LINC00954-202ENST00000449086 GMEB2Q9UKD1 530 aa7.54□□□□□ -1.2
LINC00954-202ENST00000449086 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 TRBV5-4A0A0C4DH59 114 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 A0A0G2JN53 185 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ANXA2P2A6NMY6 339 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 H0YIV9 168 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SOCS6O14544 535 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SPDEFO95238 335 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 WNT1P04628 370 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 MRPL3P09001 348 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SULT1A3P0DMM9 295 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SULT1A4P0DMN0 295 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 PCSK2P16519 638 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 RBMS1P29558 406 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CBX5P45973 191 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 AFF3P51826 1226 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 TAS2R41P59536 307 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 B2MP61769 119 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 LGALS3BPQ08380 585 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 IRF4Q15306 451 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SLC36A2Q495M3 483 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CD200R1LQ6Q8B3 271 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 LINGO2Q7L985 606 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 C6orf120Q7Z4R8 191 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 TMEFF1Q8IYR6 380 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SUMF1Q8NBK3 374 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SMAP2Q8WU79 429 aaPredicted RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ATOH1Q92858 354 aaPredicted RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 KLK6Q92876 244 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 PTP4A1Q93096 173 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 HGDQ93099 445 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 C12orf57Q99622 126 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 TEX101Q9BY14 249 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ZDHHC5Q9C0B5 715 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 C20orf85Q9H1P6 137 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SLC6A15Q9H2J7 730 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 OR51I1Q9H343 314 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CEP192Q8TEP8 1941 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 A0A1W2PR77 199 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 IRGMA1A4Y4 181 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 TRABD2BA6NFA1 517 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 MFSD2BA6NFX1 497 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CPSF4LA6NMK7 179 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ARPC1BO15143 372 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CASC3O15234 703 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 RNF13O43567 381 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 KCNJ13O60928 360 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 SOX30O94993 753 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CATP04040 527 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 NMBP08949 121 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CXCL2P19875 107 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 ATP5A1P25705 553 aaKnown RBP7.53□□□□□ -1.2
LINC00954-202ENST00000449086 CD38P28907 300 aa7.53□□□□□ -1.2
LINC00954-202ENST00000449086 IGFALSP35858 605 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms