RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SLC2A7Q6PXP3 512 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 CNEP1R1Q8N9A8 125 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 RFWD2Q8NHY2 731 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC38A5Q8WUX1 472 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 RSPO3Q9BXY4 272 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 OPN3Q9H1Y3 402 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 RMND5AQ9H871 391 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 EXOSC3Q9NQT5 275 aaKnown RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC25A37Q9NYZ2 338 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ING1Q9UK53 422 aaPredicted RBP12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 SLC35A3Q9Y2D2 325 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 DSPPQ9NZW4 1301 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 ACANP16112 2415 aa12.58□□□□□ -0.4
RTFDC1-204ENST00000449062 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 TRBV5-3A0A0A0MS03 114 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 EDF1O60869 148 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 FCGR2AP12318 317 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 PGCP20142 388 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 SFTPDP35247 375 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 CD79BP40259 229 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ANXA11P50995 505 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ATP4BP51164 291 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 SIRPAP78324 504 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 RGNQ15493 299 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 PAGE3Q5JUK9 113 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 PDSS1Q5T2R2 415 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 LRIF1Q5T3J3 769 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 DNAJC14Q6Y2X3 702 aaPredicted RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 C22orf34Q6ZV56 151 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 PLEKHM3Q6ZWE6 761 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ADGRG3Q86Y34 549 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 CMIPQ8IY22 773 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 GOLGA6L1Q8N7Z2 621 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 DYDC1Q8WWB3 177 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 DACH2Q96NX9 599 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 CCDC106Q9BWC9 280 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ZNF385DQ9H6B1 395 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 GLRX2Q9NS18 164 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 DNAJB12Q9NXW2 375 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 ELOVL5Q9NYP7 299 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 CLEC4AQ9UMR7 237 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
RTFDC1-204ENST00000449062 SETD2Q9BYW2 2564 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 A0A096LPI6 279 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 FAAHO00519 579 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 CYP7B1O75881 506 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 NUDT7P0C024 238 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 NR2F1P10589 423 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 ENPP1P22413 925 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 RAC3P60763 192 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 IRX1P78414 480 aaPredicted RBP12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 SELENBP1Q13228 472 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 ZNF239Q16600 458 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 C10orf111Q8N326 155 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 OR6K3Q8NGY3 331 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 RNF128Q8TEB7 428 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 NRGNQ92686 78 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 GPATCH1Q9BRR8 931 aaKnown RBP12.56□□□□□ -0.4
RTFDC1-204ENST00000449062 A0A1W2PNR3 127 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 GJE1A6NN92 205 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CLIC1O00299 241 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 AP3D1O14617 1153 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 SYNGR4O95473 234 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 DBIP07108 87 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 KLK2P20151 261 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CCKARP32238 428 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 RYKP34925 604 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 UGT2B10P36537 528 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 APOBEC1P41238 236 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 ACAA2P42765 397 aaKnown RBP12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CRATP43155 626 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CPA2P48052 419 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CCR4P51679 360 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 DSTNP60981 165 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 MERTKQ12866 999 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 C6orf10Q5SRN2 563 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 DLEU7Q6UYE1 221 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 TMPPEQ6ZT21 453 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CDH24Q86UP0 819 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CDC20BQ86Y33 519 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 TMCO5AQ8N6Q1 288 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 ATP6V1C2Q8NEY4 427 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 TMEM234Q8WY98 164 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 CPNE4Q96A23 557 aaPredicted RBP12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 SPDL1Q96EA4 605 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 ADAM19Q9H013 955 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 LIME1Q9H400 295 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
RTFDC1-204ENST00000449062 BCL2L10Q9HD36 194 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms