RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ZSCAN5BA6NJL1 495 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 LRRN3E7EW58 273 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 BTN3A3O00478 584 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 OGG1O15527 345 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 SULT1A3P0DMM9 295 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 SULT1A4P0DMN0 295 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 EPXP11678 715 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 ATF1P18846 271 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 CST6Q15828 149 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 DCST2Q5T1A1 773 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 FHL5Q5TD97 284 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 SLC22A10Q63ZE4 541 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 FAAH2Q6GMR7 532 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 TRIM43Q96BQ3 446 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-204ENST00000447182 LRRN3Q9H3W5 708 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 OR6C2Q9NZP2 312 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 KCNE5Q9UJ90 142 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 HEBP2Q9Y5Z4 205 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 ANKRD61A6NGH8 418 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-204ENST00000447182 GPR171O14626 319 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 H2AFB2P0C5Z0 115 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 CPMP14384 443 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 PYCR1P32322 319 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 CTNNB1P35222 781 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 DBPQ10586 325 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-204ENST00000447182 CRMP1Q14194 572 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 TOR2AQ5JU69 321 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 FAM78AQ5JUQ0 283 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 CACUL1Q86Y37 369 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 SERINC2Q96SA4 455 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 DUSP22Q9NRW4 184 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 GLTPQ9NZD2 209 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 EMC3Q9P0I2 261 aa17.65■□□□□ 0.42
SDCBP-204ENST00000447182 SMIM10L1P0DMW3 83 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 CLUP10909 449 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 SNRPNP63162 240 aaKnown RBP17.64■□□□□ 0.41
SDCBP-204ENST00000447182 HSF2Q03933 536 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 CAMK2DQ13557 499 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 KLF9Q13886 244 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-204ENST00000447182 CAMK1Q14012 370 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 PDGFRLQ15198 375 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF613Q6PF04 617 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 SLC43A2Q8N370 569 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 OR56B4Q8NH76 319 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 PMM1Q92871 262 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 SMIM10Q96HG1 83 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 RADILQ96JH8 1075 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 CMTM3Q96MX0 182 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 RSPH9Q9H1X1 276 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-204ENST00000447182 MEPEQ9NQ76 525 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-204ENST00000447182 C14orf105Q9NVL8 296 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 RABL2AQ9UBK7 228 aaPredicted RBP17.64■□□□□ 0.41
SDCBP-204ENST00000447182 SERGEFQ9UGK8 458 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 FBXL21Q9UKT6 434 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 SPATA2Q9UM82 520 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 RABL2BQ9UNT1 228 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 COLEC10Q9Y6Z7 277 aa17.64■□□□□ 0.41
SDCBP-204ENST00000447182 LOC105369274A0A096LPK9 316 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TEX51A0A1B0GUA7 166 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 FLRT2O43155 660 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 ARL6IP5O75915 188 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SLC35G6P0C7Q6 338 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 NT5EP21589 574 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TLX1P31314 330 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 RIPPLY1Q0D2K3 151 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SUZ12Q15022 739 aaKnown RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 ST3GAL2Q16842 350 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TRMT12Q53H54 448 aaKnown RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 IDO2Q6ZQW0 420 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SSX6Q7RTT6 188 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR4N4Q8N0Y3 316 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR4D9Q8NGE8 314 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 GIMAP1Q8WWP7 306 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 PEX11GQ96HA9 241 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 STACQ99469 402 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 NPTNQ9Y639 398 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TRAV27A0A087WT01 109 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TRABD2BA6NFA1 517 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 PEX12O00623 359 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 CD1AP06126 327 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 UCHL1P09936 223 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SNRPBP14678 240 aaKnown RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 CCR6P51684 374 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SIM1P81133 766 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 GAS6Q14393 721 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OVCH1Q7RTY7 1134 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 DGLUCYQ7Z3D6 616 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 LSRQ86X29 649 aaPredicted RBP17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR4N5Q8IXE1 308 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR8H3Q8N146 312 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 ZNF687Q8N1G0 1237 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SYS1Q8N2H4 156 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR13C5Q8NGS8 318 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 OR51Q1Q8NH59 317 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 RPLP0P6Q8NHW5 317 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 SMIM4Q8WVI0 70 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 THAP4Q8WY91 577 aa17.63■□□□□ 0.41
SDCBP-204ENST00000447182 TM4SF19Q96DZ7 209 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms